PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0032s0353.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GATA
Protein Properties Length: 288aa    MW: 32506.6 Da    PI: 7.5178
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0032s0353.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.67.3e-18201235135
                 GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                          Cs+C + kTp+WR gp g+ktLCnaCG++y++ +l
  Kaladp0032s0353.1.p 201 CSHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRL 235
                          *******************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MDEFFRVDDL LNFSNDDHVF SSITTDHSDH HHHHHHHLHQ NQQLNSSSEH MVDYQLKNYY  60
DRSNNLPRCN NSSFSSVSGP AAAAAAAFGA QHFSYEFTDQ LCVPNDDVAE LEWLSNFVDD  120
SFNDFNSNAL TGTLMSQSHT SIPSAARSKR SRQRTWKAST SLISSSTAPQ IDRSRTKRQE  180
TNSMSEFVDD SSSSSGGVRR CSHCASEKTP QWRTGPMGPK TLCNACGVRY KSGRLVPEYR  240
PAASPTFVLT QHSNSHRKVM ELRRQKEVTI KQQQGHVYRH SHDFEVC*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1149154KRSRQR
2173178RSRTKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45050.14e-64GATA family protein