PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0032s0311.3.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family AP2
Protein Properties Length: 456aa    MW: 51167.7 Da    PI: 9.0427
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0032s0311.3.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.38.2e-18122171155
                  AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                          s+y+GV++++++grW+++I+d      + k+++lg f+ta +Aa+a+++a++k++g
  Kaladp0032s0311.3.p 122 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHDAARAYDRAALKFRG 171
                          78*******************......55************************997 PP
2AP230.68.2e-10214264155
                  AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                          s+y+GV+ +k   rW+A+   +     +k+++lg f  + eAa+a++ a+ + +g
  Kaladp0032s0311.3.p 214 SKYRGVTLHK-CWRWEARMGQF--L-GKKYVYLGLFNCEVEAARAYDSAAIECNG 264
                          89********.579****5553..1.26**********99**********98766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 456 aa     Download sequence    
MMLDLNLMVA EEEVVHMAAE KFSKSCGTSN SSIANVTEAD EDSCSRAGET PYFNLSVGRE  60
KMNTIELFPM RMAVGDFGDE GLKKKQMDIS FNQNGSSKVK EVQQLQPLVA RKSRRGPRSR  120
SSQYRGVTFY RRTGRWESHI WDCGKQVYLG GFDTAHDAAR AYDRAALKFR GVEADINFNP  180
VDYDEDMKKM VNLTKEQFVH ILRRQSTGFA RGSSKYRGVT LHKCWRWEAR MGQFLGKKYV  240
YLGLFNCEVE AARAYDSAAI ECNGREAFTN FAPITYGGGT TFERNSLGCD QHLNLNLSIS  300
LPSSGYEPTE KQVSVHPHPK YIYHPYSLLD ARKPNVDEPS SGGHSRLSLY PQLLFNAEVQ  360
APNKRNEQNS HFQSFPNWTW KLNGQASPAP MRLLSSAASS GFSSPALSVP TAAIHLTKPL  420
HHTAHTHYFI QPTATTMGVP PGMFHYQDQI QLPPR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.31e-84AP2 family protein