PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0029s0096.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | WOX | ||||||||
Protein Properties | Length: 135aa MW: 14960.9 Da PI: 8.9143 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 54 | 2.8e-17 | 14 | 75 | 1 | 57 |
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r +R+++t eq++ Leel++ +p+a ++ ++ ++l +++ ++V++WFqN++a++k+ Kaladp0029s0096.1.p 14 RAPRWCPTGEQVTLLEELYKGgLTNPTAGQIHQIVTHLsrfgKVQGKNVFYWFQNHKARDKQ 75 679*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 104.2 | 8.5e-34 | 15 | 76 | 3 | 64 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +RW+Pt eQ+++Leelyk Gl +P++ +i++i ++L+++Gk+++kNVfyWFQN+kaR++q+ Kaladp0029s0096.1.p 15 APRWCPTGEQVTLLEELYKGGLTNPTAGQIHQIVTHLSRFGKVQGKNVFYWFQNHKARDKQR 76 58***********************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 135 aa Download sequence |
MCPAVGTSGA GCARAPRWCP TGEQVTLLEE LYKGGLTNPT AGQIHQIVTH LSRFGKVQGK 60 NVFYWFQNHK ARDKQRARKT LAGSEKQTAE LWMSRCSPNT HFICKNEMAF QRCNSSSSVS 120 PFSNDEVNYD CTLN* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28610.1 | 4e-29 | WOX family protein |