PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0028s0090.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WRKY
Protein Properties Length: 335aa    MW: 36232.9 Da    PI: 10.1652
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0028s0090.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.49.1e-31263320359
                          -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                          D ++WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ ++p+++++tYegeHnh 
  Kaladp0028s0090.1.p 263 DDFSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERAVDEPTMLIVTYEGEHNHA 320
                          99************************988****************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MAVDLMTRYN SLSSKLEDPA VKEAASGLES VGKLIRLLSQ QPPPQQQKFS SSTAADRAEE  60
DYNAVANDAV LKFNKVITLL SSRTRTGHAR FRRAPVPQSA PATSFFKKEP ESLDGGSSAA  120
ANLCRVYRAT PLQQIPPPPK QSQSGRHFQQ IPRSANESTT TINFSNSSVP SSFFSSLTGD  180
SVEDSVKQIS SSSAFQSGSC LSAKPPLSSS SSFKRKCSSS DVAAGKCGES SANCHCSKRR  240
KMRMKRVVRV PAISMKLADI PPDDFSWRKY GQKPIKGSPH PRGYYKCSSV RGCPARKHVE  300
RAVDEPTMLI VTYEGEHNHA LTVAETSGLI LESS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23320.14e-49WRKY family protein