PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0028s0023.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family B3
Protein Properties Length: 331aa    MW: 38291.1 Da    PI: 9.8767
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0028s0023.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B353.34.9e-17361181199
                          HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                   B3  11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                          l+++ l++pkkfa +   k   + t++l+ ++g  W+vk+    + + ++l++GW +F  ++ L+e Df+vF+++g+s+f   v++f++
  Kaladp0028s0023.1.p  36 LSRSELRVPKKFAMKLPVK--LGETIKLRGPTGDIWSVKV--VETEEDVLLREGWPRFLYDHLLNEYDFLVFHYTGSSSF--DVSIFDR 118
                          67788********777544..7789***************..99999*****************************9999..9999998 PP
2B354.42.3e-17138227199
                          EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
                   B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                          ffkv+  +  ++s+ l +pkk   ++ +k   +  ++l+ +sg++W+v    +  +g  +l++GW eFv+++ L+e  f+vF+++g+s+f
  Kaladp0028s0023.1.p 138 FFKVM--NKEFRSK-LLIPKKLSVRFVEK--MGNIIRLKGPSGNVWKVGA--KTAGGDAILGRGWAEFVSDHSLDESNFLVFHHTGDSSF 220
                          78888..7777776.99999987777433..4558***************..999999****************************9999 PP

                          ..EEEEE-S CS
                   B3  91 elvvkvfrk 99 
                             v +f+ 
  Kaladp0028s0023.1.p 221 --SVLIFDP 227
                          ..9999885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MAEMDEREEI SRAMEEQIYW NQFESTKHHF FETVELSRSE LRVPKKFAMK LPVKLGETIK  60
LRGPTGDIWS VKVVETEEDV LLREGWPRFL YDHLLNEYDF LVFHYTGSSS FDVSIFDRNG  120
CMKDLRMLQD QFEIKPHFFK VMNKEFRSKL LIPKKLSVRF VEKMGNIIRL KGPSGNVWKV  180
GAKTAGGDAI LGRGWAEFVS DHSLDESNFL VFHHTGDSSF SVLIFDPSRC EKESSHFVKP  240
AARSADLRGE RARKMGKLPA GFTGGGDHER EETPISKMQC KVNPKMKGKM RIQEKNDTPA  300
HKTMKLPKEL TLEQLQDLKI KHNQRKQQRR *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.12e-18B3 family protein