PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0024s0920.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GRAS
Protein Properties Length: 594aa    MW: 64918.6 Da    PI: 4.6541
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0024s0920.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS334.42e-1022295935374
                 GRAS   5 LlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                          +l+ A+ v+s + e+a + L++l + +s++gdp++R+a++f+e L +r ++   +  + lp+ +t   +s+e + ++k++++++P+ kf+
  Kaladp0024s0920.2.p 229 VLDYARIVDS-EPERAASSLTQLLKSVSETGDPIERVAFHFAEVLYERATH---RPGNFLPACST---TSEEFTLSYKALNDACPYSKFA 311
                          5566776666.67788899*******************************9...33444544444...4899****************** PP

                 GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvl 181
                          hltaNqaIlea+e+++++Hi+Df+i qG+QW+aLlqaLa+R+ g+p +++i g+ +p+ g     +l++tg+rL++fA+ l+++fef++ 
  Kaladp0024s0920.2.p 312 HLTANQAILEAMEKAQMIHIVDFGIVQGVQWAALLQALATRTTGKPsRIKISGIPAPALGpsPVAALSATGKRLTEFAKLLDLNFEFEP- 400
                          ******************************************666659*********99999999************************. PP

                 GRAS 182 vakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl 271
                          v   l++l+ ++++v+++E++aV+++lql++llde+    +   + L+l +slsP +v++ e ea +n+ +F++r+ +al yy+alf+sl
  Kaladp0024s0920.2.p 401 VLAPLSELNESSFKVDQDESVAVSFMLQLYNLLDETPMAVE---SALRLARSLSPCIVTLGEYEARLNRVPFVDRVKNALTYYTALFESL 487
                          799******************************99888777...9********************************************* PP

                 GRAS 272 eaklpreseerikvErellgreivnvvacegae.rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslv 359
                          e +l r+s +ri +E+ ll+++i  v+  e+   +rer+e    W+  +e+aGF pv+ls++a +qak ll +++ +  y++ e+  +++
  Kaladp0024s0920.2.p 488 EPSLERDSADRIQLEKSLLRQRIAGVIGPEQPGvKRERMEDRDGWQLLMESAGFVPVKLSHYAISQAKILLWNYNyNSHYSIVESPPAFL 577
                          ******************************99889****************************************9999******99999 PP

                 GRAS 360 .lgWkdrpLvsvSaWr 374
                           l W + p++svS+Wr
  Kaladp0024s0920.2.p 578 sLAWGELPVLSVSSWR 593
                          9**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 594 aa     Download sequence    
MAYLCGDSGN LMAIAQQIQQ KEQQENYQQQ PIHHQPDYLQ HQLAGANPFS VTGTWTASAS  60
QLGYGLAGSG FPDQFPGNDA ASEGVFPFSN PMEFRFTEFD SADWIMEGLI GGGEPSSTAG  120
YEAWQSQPDF SNLYAADPFA VPPSGDLSRL VFSAPLKTDG LVQPQEPICA PPPAPPSPLR  180
PPHVDEEVAV APPPPAPKPQ KPEISKANTR LLDAKPSSPQ PPPPLLMAVL DYARIVDSEP  240
ERAASSLTQL LKSVSETGDP IERVAFHFAE VLYERATHRP GNFLPACSTT SEEFTLSYKA  300
LNDACPYSKF AHLTANQAIL EAMEKAQMIH IVDFGIVQGV QWAALLQALA TRTTGKPSRI  360
KISGIPAPAL GPSPVAALSA TGKRLTEFAK LLDLNFEFEP VLAPLSELNE SSFKVDQDES  420
VAVSFMLQLY NLLDETPMAV ESALRLARSL SPCIVTLGEY EARLNRVPFV DRVKNALTYY  480
TALFESLEPS LERDSADRIQ LEKSLLRQRI AGVIGPEQPG VKRERMEDRD GWQLLMESAG  540
FVPVKLSHYA ISQAKILLWN YNYNSHYSIV ESPPAFLSLA WGELPVLSVS SWR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66770.11e-158GRAS family protein