PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0024s0608.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Trihelix

Protein Properties

Length: 395aa MW: 42313.6 Da PI: 9.3903

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0024s0608.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	52.1	1.7e-16	31	126	2	74
trihelix 2 WtkqevlaLiearremeerlrrgk.......................lkkplWeevskkmrergferspkqCkekwenlnkrykkikege 68 Wt qe+++Liea++ ++er ++ ++ +W++v +++++rg+ rs++qC++kw+nl ++ykk+++ e Kaladp0024s0608.1.p 31 WTLQETMVLIEAKKMDDERRLKRPgcssseqqqvtgsqemlmmirnkPAELRWKWVEDYCWRRGCFRSQNQCNDKWDNLMRDYKKVRDYE 120 ***********95555544322235556667777777777777779999************************************* PP trihelix 69 kkrtse 74 +k +++ Kaladp0024s0608.1.p 121 RKLAEQ 126 *98655 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
MADQSGGAGG GGVVASGGGG GLMREYRKGN WTLQETMVLI EAKKMDDERR LKRPGCSSSE 60 QQQVTGSQEM LMMIRNKPAE LRWKWVEDYC WRRGCFRSQN QCNDKWDNLM RDYKKVRDYE 120 RKLAEQNAAA GTSSSSSLGG SVSYWNMDRS ERKERSLPSN MSSTIYEALV DVVEKKVGAG 180 SSSAAALLSP ATVVNTSGTP TPTDVLQAAT PTIMPPTAAL SLLHQQHLNA SVAARGLPLP 240 EIAGVAPLPL PPPLPSAQPN IPTCQPATTT IRDSSDSDTS SDSPAKRRRK DKGPETGGGP 300 PSSRNEAAGV ANAISKGASK ISEAIQASES RREERHREML GLKQRRLQIE EARMEVNRQG 360 MSGLAEAINN LANSIMALAA SNNNHGQAPP PPPP*

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

MADQSGGAGG GGVVASGGGG GLMREYRKGN WTLQETMVLI EAKKMDDERR LKRPGCSSSE  60
QQQVTGSQEM LMMIRNKPAE LRWKWVEDYC WRRGCFRSQN QCNDKWDNLM RDYKKVRDYE  120
RKLAEQNAAA GTSSSSSLGG SVSYWNMDRS ERKERSLPSN MSSTIYEALV DVVEKKVGAG  180
SSSAAALLSP ATVVNTSGTP TPTDVLQAAT PTIMPPTAAL SLLHQQHLNA SVAARGLPLP  240
EIAGVAPLPL PPPLPSAQPN IPTCQPATTT IRDSSDSDTS SDSPAKRRRK DKGPETGGGP  300
PSSRNEAAGV ANAISKGASK ISEAIQASES RREERHREML GLKQRRLQIE EARMEVNRQG  360
MSGLAEAINN LANSIMALAA SNNNHGQAPP PPPP*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	287	292	RRRKDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	7e-55	Trihelix family protein