PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0024s0555.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 333aa    MW: 37058.4 Da    PI: 5.5132
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0024s0555.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.61e-161461148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         rgrWT+eEde l ++++  G g+W+++++  g+ R++k+c++rw +yl
  Kaladp0024s0555.1.p 14 RGRWTAEEDEVLMKYIQVNGEGSWRSVPKNAGLQRCGKSCRLRWINYL 61
                         8*********************************************97 PP
2Myb_DNA-binding51.72.1e-1667112148
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                          rg+ T++E+ l++ +++ lG++ W++Ia +++ gRt++++k++w+++l
  Kaladp0024s0555.1.p  67 RGNITPQEENLIISLHASLGNR-WSLIAGHLP-GRTDNEIKNYWNSHL 112
                          7999******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MGRTPCCEKV GLKRGRWTAE EDEVLMKYIQ VNGEGSWRSV PKNAGLQRCG KSCRLRWINY  60
LRPGLKRGNI TPQEENLIIS LHASLGNRWS LIAGHLPGRT DNEIKNYWNS HLNRKLHGFT  120
ATPEKNESFE IFARNIDERG DKKSSSGSGM TKKDTGLQRS ASAENHEPAA RAKSMQSITD  180
QLEPLDDVGR GELMRVNPKT GISEPKPNDF IGKQMEAPCS NEESIGSVML CPETQGAWEG  240
LEYETKGAGG LVEQGGLDDI IAPLQVTSST HRRENGGGWG YPTIGDSREW CTGAPSINQE  300
WVDWQYIDGL KKLDSEEDGE MLSWFWNDNY GI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47460.19e-72MYB family protein