PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0022s0217.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | Trihelix | ||||||||
Protein Properties | Length: 300aa MW: 33983.1 Da PI: 10.5274 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 64.5 | 2.3e-20 | 45 | 130 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergf...erspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +Wt +e+ Li+a+++++ +l+rg+lk+++Weev+ + ++ g+ +++++qC++k+e+l+kr++++k+ ++r ss +p+f ++ Kaladp0022s0217.1.p 45 QWTPEETTSLIQAYQDKWYSLKRGQLKAHQWEEVAVTVaARCGYdeaTKTSTQCRHKMEKLRKRFRAEKRKGGGR----SSAWPFFGFMD 130 7*********************************998864445543389********************999986....789****8887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 300 aa Download sequence |
MAATPSPSSS PPTQPSESQS LLVKAAKPIL LAIPVQTQKK AQAVQWTPEE TTSLIQAYQD 60 KWYSLKRGQL KAHQWEEVAV TVAARCGYDE ATKTSTQCRH KMEKLRKRFR AEKRKGGGRS 120 SAWPFFGFMD RMERGPRPIS ARPVNMVRFQ NPGESGEEED CGDNHRRVSS RSRSINSLIM 180 KPHTIVNIYP GSPPPPSRAR KGAELAVYKD GEFELEEENG FGKKRLLLSG LAAEMRAFEQ 240 RIAWVENKKM EMMRDTQKMR MEMESKRLKM IHDSQAKIVE TIYNGGPLKK IKIRTTSDM* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24860.1 | 7e-39 | Trihelix family protein |