PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0019s0141.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Trihelix

Protein Properties

Length: 321aa MW: 35536.4 Da PI: 6.6504

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0019s0141.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	47.9	3.6e-15	50	139	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 +W++ + +Li+a e+ +l+rg+lk+++W+ev++ + + ++ ++ qCk++++ ++k+yk +k + +s+ ++p+f++l Kaladp0019s0141.1.p 50 CWSEAATSVLIDAWGERYLALSRGNLKQKHWKEVADIVsssgeMCGKTPKTDMQCKNRIDTVKKKYKLEKSKMVASASPP-CSWPFFHKL 138 7*************************************999999********************9999874444.47****9 PP trihelix 86 e 86 e Kaladp0019s0141.1.p 139 E 139 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence
MEDYDDDDDT PTPDPNDGRI TVSLAADAVS ADHLAHNAKP SSGGGAREDC WSEAATSVLI 60 DAWGERYLAL SRGNLKQKHW KEVADIVSSS GEMCGKTPKT DMQCKNRIDT VKKKYKLEKS 120 KMVASASPPC SWPFFHKLEF LIGPAKSPAP TRTHSNLHNT FKKQQQQPAR QDSDSSETDS 180 PDSPDSTDTD PPKPAKKQRF NHPISTATSQ PNGKMNINPR GGSSSVGDLT EAILNLAQVY 240 EQAENAKLRL VVDMEKNRMN FTKELESQRM QLFMKTQMEI TQMKESAMRD SGHNHLHSQL 300 HKSETNLISN NIDNHTSDST *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G14180.1	2e-45	Trihelix family protein