PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0016s0257.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | SRS | ||||||||
Protein Properties | Length: 222aa MW: 24539.3 Da PI: 8.9396 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 170.9 | 6.4e-53 | 12 | 152 | 3 | 153 |
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstkls 92 s +++C+dCGnqak+dC+++RCRtCCksrgf C+thvkstWvpa++rr+ ++q++ + +a+s ++ +++ +l + + + Kaladp0016s0257.1.p 12 SSRMACHDCGNQAKRDCVYMRCRTCCKSRGFRCQTHVKSTWVPAYRRRHSHTQHHHHQLL------DASSTGQQ----QHAVQLLNPRGP 91 56899*******************************************975544443222......22222222....345566677777 PP DUF702 93 saeskkeletsslPeevsseavfrcvrvssvdd.geeelaYqtavsigGhvfkGiLydqGle 153 + +s e e +P+e+ s+a+frcv v+s +d e++aYq+avsigGh+fkGiLydqG+e Kaladp0016s0257.1.p 92 NPTSGLE-EGLMFPPEITSSAMFRCVVVRSSEDnVIEQYAYQAAVSIGGHLFKGILYDQGPE 152 7766644.4556*****************999945688**********************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MRQGVGARSS SSSRMACHDC GNQAKRDCVY MRCRTCCKSR GFRCQTHVKS TWVPAYRRRH 60 SHTQHHHHQL LDASSTGQQQ HAVQLLNPRG PNPTSGLEEG LMFPPEITSS AMFRCVVVRS 120 SEDNVIEQYA YQAAVSIGGH LFKGILYDQG PELSRTPQHQ NPTTAPPPSH HHHHQYLGNE 180 GPSSSTAPPP LEAPATAFAT QQRPGYNPSP FQTGTHVFFH Q* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75520.1 | 1e-43 | SRS family protein |