PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0016s0134.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 270aa    MW: 29848.6 Da    PI: 7.4428
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0016s0134.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.84.5e-171562148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         +g+W+ eEd+ l+ +v q+G g+W++ ++  g+ R++k+c++rw +yl
  Kaladp0016s0134.1.p 15 KGPWSLEEDQVLISYVSQHGHGRWRSLPKLAGLLRCGKSCRLRWTNYL 62
                         79******************************99************97 PP
2Myb_DNA-binding45.22.1e-1469113248
                          SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                           ++T+eE++l  +++  lG++ W++Ia+ ++ gRt++++k+ w+++l
  Kaladp0016s0134.1.p  69 APFTEEEEKLVTQLHGILGNR-WTAIAAQLP-GRTDNEIKNLWNTHL 113
                          68*******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MGKKRPCCEK NGLKKGPWSL EEDQVLISYV SQHGHGRWRS LPKLAGLLRC GKSCRLRWTN  60
YLRPDIKRAP FTEEEEKLVT QLHGILGNRW TAIAAQLPGR TDNEIKNLWN THLRKRLLCM  120
GIDPLTHEPF ATSNGPALAP AAQWESARLE AEARLSRPRE SLQPGASSDH FLRLWNSEVG  180
EAFRLRARGA YVSSTSSIKG CCDSDMASTP AAKIGKGETC TSPTAASSSS DELDDSSDSA  240
LQLLTDYAFD DDMSFLADHI SDYYSFPSM*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61250.14e-96MYB family protein