PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0016s0057.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 349aa MW: 38750.5 Da PI: 8.4593

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0016s0057.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.9	9.8e-10	185	232	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55 +h+ +Er RR+ri +++ L+ l+P + +K Ka iL + ++Y++sLq Kaladp0016s0057.2.p 185 SHSLAERVRRERISERMKMLQALVPGC-----EKvTGKALILDEIINYVQSLQ 232 8***********************9.....6769**************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MAAYSYQPHH FLLSSTLSPN TPFDISGFVN EGNITSKNST TVAFSNNLVS AEFLPMEVFH 60 EGFSDAAGVY QSSCHDHSSK MHSAASSFDM EKQVEEMGEQ VTQKLTPCNG HEEKKKKTRK 120 GSSLDSKRGK LQGGKAKKQK KSDNRQNVKE KKPKVDKKNQ KQEGSEDAQK DYIHVRARRG 180 QATDSHSLAE RVRRERISER MKMLQALVPG CEKVTGKALI LDEIINYVQS LQNQIEFLSM 240 KLGSFNPIYS NFVMDLDAAM LRQETLTRLA ASQPSGSSQQ CSPTAVNYNS STTTFTTPTT 300 VGYHPLIEAS LFLQQEAAEN LTWDQLDTQT QNLMNQFGGL ANAICSFQ*

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MAAYSYQPHH FLLSSTLSPN TPFDISGFVN EGNITSKNST TVAFSNNLVS AEFLPMEVFH  60
EGFSDAAGVY QSSCHDHSSK MHSAASSFDM EKQVEEMGEQ VTQKLTPCNG HEEKKKKTRK  120
GSSLDSKRGK LQGGKAKKQK KSDNRQNVKE KKPKVDKKNQ KQEGSEDAQK DYIHVRARRG  180
QATDSHSLAE RVRRERISER MKMLQALVPG CEKVTGKALI LDEIINYVQS LQNQIEFLSM  240
KLGSFNPIYS NFVMDLDAAM LRQETLTRLA ASQPSGSSQQ CSPTAVNYNS STTTFTTPTT  300
VGYHPLIEAS LFLQQEAAEN LTWDQLDTQT QNLMNQFGGL ANAICSFQ*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	114	140	KKKKTRKGSSLDSKRGKLQGGKAKKQK
2	114	154	KKKKTRKGSSLDSKRGKLQGGKAKKQKKSDNRQNVKEKKPK
3	116	156	KKKKTRKGSSLDSKRGKLQGGKAKKQKKSDNRQNVKEKKPK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50915.2	5e-47	bHLH family protein