PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0015s0116.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Protein Properties

Length: 777aa MW: 84561.7 Da PI: 6.3467

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0015s0116.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	63.2	4.1e-20	625	722	2	96
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldg 86 +kvl++sdv+++gr+vlpkk ae+h ++ + ++ + +ed ++++W++++++ ++ks++y+l+ ++ +Fvk+ngL+egDf+v++ + Kaladp0015s0116.1.p 625 QKVLKQSDVGSLGRIVLPKKEAETHlpQLTARDGINIAMEDiGTSNVWNMRYRFwpNNKSRMYLLE-NTGDFVKSNGLQEGDFIVIY--S 711 79***********************999999****7778***99777777777777.******************..6 PP S.SEE..EEEE CS B3 87 r.sefelvvkv 96 + ++++++++ Kaladp0015s0116.1.p 712 DiKCGKYMIRG 722 77999888765 PP

Sequence ? help Back to Top
Protein Sequence Length: 777 aa Download sequence
MVTKAGVGLE EGGRRSDNLM HAAPPDAVEV DGDDVMVDFS CFGGYSSAEA AMEEADHQDL 60 MENAAAIFCD DLIPPLPDFQ CMSSSSSSSS STVVKPVAYR STASSSVSSS SSSWAVLRSD 120 GEEQHNAGGE CINNHQPQQV ALSSTASMEM HPQSGQSNRL DEGDDIGCMD VMETLSYMDL 180 LDENGQVWDY SDSPVFDCNR EEAFQCNREA ENQPQQPHAA AATASEFVHE KGDNSEGLDK 240 SEDLAMVFFE WLKSNKESVS AEDLRSIKLK KSTVESAAKR LGNGKEGMKR LLQLILEWVQ 300 QHQLQRKRRR EEEAAAAATM VGGQAGFPNQ PYPVQYPTQP FQSPDADFSN SNLQPDPIGF 360 TGAVNPPPWS VGSGAGFDHM VAVGVPAAGA GYVGGGDPFG HLSNMVDQPA ATPWPAAAPP 420 FCMNYSDNAR SVQNLSPVAL QQAYPFGAGA FNQYPYQYYP AVGNGSTFNG PASDDGLART 480 GSSATKEARK KRMARQRRFS SHHRHHYHHH NHNSSSNSHG HHHVNNGQSN QMNMAVGTSP 540 RGRVNMEENY ANIGQPPGGG NWACWGNAAA PPPAPLPLVP NVAKSFQVNE VCHSPLQQPQ 600 NYQRPNAPER RPGLKAEKNL RFLLQKVLKQ SDVGSLGRIV LPKKEAETHL PQLTARDGIN 660 IAMEDIGTSN VWNMRYRFWP NNKSRMYLLE NTGDFVKSNG LQEGDFIVIY SDIKCGKYMI 720 RGVKVRQQGP RPDNRRSGKA LKKNPASTSN GPSPSPNNTP HKETSPKPDM IKELEA*

Sequence ? help Back to Top

Protein Sequence Length: 777 aa Download sequence

MVTKAGVGLE EGGRRSDNLM HAAPPDAVEV DGDDVMVDFS CFGGYSSAEA AMEEADHQDL  60
MENAAAIFCD DLIPPLPDFQ CMSSSSSSSS STVVKPVAYR STASSSVSSS SSSWAVLRSD  120
GEEQHNAGGE CINNHQPQQV ALSSTASMEM HPQSGQSNRL DEGDDIGCMD VMETLSYMDL  180
LDENGQVWDY SDSPVFDCNR EEAFQCNREA ENQPQQPHAA AATASEFVHE KGDNSEGLDK  240
SEDLAMVFFE WLKSNKESVS AEDLRSIKLK KSTVESAAKR LGNGKEGMKR LLQLILEWVQ  300
QHQLQRKRRR EEEAAAAATM VGGQAGFPNQ PYPVQYPTQP FQSPDADFSN SNLQPDPIGF  360
TGAVNPPPWS VGSGAGFDHM VAVGVPAAGA GYVGGGDPFG HLSNMVDQPA ATPWPAAAPP  420
FCMNYSDNAR SVQNLSPVAL QQAYPFGAGA FNQYPYQYYP AVGNGSTFNG PASDDGLART  480
GSSATKEARK KRMARQRRFS SHHRHHYHHH NHNSSSNSHG HHHVNNGQSN QMNMAVGTSP  540
RGRVNMEENY ANIGQPPGGG NWACWGNAAA PPPAPLPLVP NVAKSFQVNE VCHSPLQQPQ  600
NYQRPNAPER RPGLKAEKNL RFLLQKVLKQ SDVGSLGRIV LPKKEAETHL PQLTARDGIN  660
IAMEDIGTSN VWNMRYRFWP NNKSRMYLLE NTGDFVKSNG LQEGDFIVIY SDIKCGKYMI  720
RGVKVRQQGP RPDNRRSGKA LKKNPASTSN GPSPSPNNTP HKETSPKPDM IKELEA*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	306	310	RKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24650.1	3e-68	B3 family protein