PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0011s1267.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family B3
Protein Properties Length: 357aa    MW: 39323.2 Da    PI: 8.8259
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0011s1267.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B347.72.8e-15501251796
                          E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
                   B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                           +p +f++e++++  ++ +++l++e+g sW+v++   +++g   l +GW+ Fv +ng++ gD++ Fkl++  + e++v+v
  Kaladp0011s1267.1.p  50 NIPMQFIRENSLSYLTDEKMVLRTETGSSWSVNIV-ANTGGDN-LCGGWSAFVIDNGINKGDICEFKLMS--RLEMWVQV 125
                          59********888888999***************4.4444444.667********************986..67778887 PP
2B357.72.1e-18180271196
                          EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
                   B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                          f++++ + +v   ++l +p +f++e++++  ++ +++l++e+g sW+v++    + g+y l +GW+ Fv +ng+k gD++ Fkl++  + 
  Kaladp0011s1267.1.p 180 FLTKMQRYNVEYGRILNIPMHFVRENSLSYCTDEKMVLRTETGSSWSVNI--VANTGGYKLCGGWSAFVIDNGIKKGDVCEFKLMS--RL 265
                          5566655666666788**********888888889***************..99999**************************986..67 PP

                          ..EEEE CS
                   B3  91 elvvkv 96 
                          e++v+v
  Kaladp0011s1267.1.p 266 EMWVQV 271
                          778887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    
MVLRTETGSS WSVNIVANTG GDKLCRGWSA FVIDNGINKG DNTHAPIMQN IPMQFIRENS  60
LSYLTDEKMV LRTETGSSWS VNIVANTGGD NLCGGWSAFV IDNGINKGDI CEFKLMSRLE  120
MWVQVTPNPK AASRTSSDGP LSCPPRNAEV KLRTVKPELE HVIQNALKAA DASSIGPPSF  180
LTKMQRYNVE YGRILNIPMH FVRENSLSYC TDEKMVLRTE TGSSWSVNIV ANTGGYKLCG  240
GWSAFVIDNG IKKGDVCEFK LMSRLEMWVQ VTPNPKVASR TSRNGPLSCP PRNAEVKLRT  300
VKPELEHVNI VANMGGYKLC GGWSAFVSDN GIKKGYVCEF KLMSRLEMRV EVTPKL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00260.12e-19B3 family protein