PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0011s1200.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 270aa    MW: 27904.2 Da    PI: 7.1421
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0011s1200.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.50.00043158180123
                          EEETTTTEEESSHHHHHHHHHHT CS
              zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                          ++C +C+k F++   L  H r+H
  Kaladp0011s1200.1.p 158 HECAICHKQFPTGQALGGHKRRH 180
                          78*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MAMEAVSHPP GYALDGFAKG KRSKRPRSEG GGEEMGLVSS LLALDEADVD LARSLMMLAS  60
GVVDEETVGE VKVGGGGGGG GGCLEVKDSV SMSAVETEST VKTASYRCTV CDKEFGSYQA  120
LGGHKASHRK LPASGVSFDT VAAASGVGGG GSGSGRVHEC AICHKQFPTG QALGGHKRRH  180
YEGVLGKQNQ HINHLQSLKN ATTSSGVTTA TTSDGAGSSL SHRGFDLNIP ALPDLWPVSR  240
FAAAEEEVES PHPARKPRVF LPNDVHIRI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.12e-31C2H2 family protein