PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0011s1026.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GRAS
Protein Properties Length: 553aa    MW: 60958.4 Da    PI: 6.5956
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0011s1026.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS355.39.1e-1091755511374
                 GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn.......sseelaalkl 83 
                          lv+lL++cAeav+ +d++ a+alL++l+ +a   g+++qR+a++f+++La r++  v+ l +    s+++          s++++  l+l
  Kaladp0011s1026.1.p 175 LVQLLIACAEAVACRDKSHASALLSELRAHAVVFGSSFQRVASCFVQGLADRMTLLVQPLGSNGFRSPATM-LglmegveSDKKAEGLSL 263
                          689****************************************************7777776554444432.235666556666666677 PP

                 GRAS  84 fsevsPilkfshltaNqaIleavegeervHiiDfdisqGl....QWpaLlqaLasRpegpp..slRiTgvgspesgskeeleetgerLak 167
                           +e++P ++f+h++aN+ Ilea+ege+ vH++D++++ Gl    QW  L+++La+R+ gpp  +l++T++g     ++++l+++g  L+ 
  Kaladp0011s1026.1.p 264 VYELCPQIQFGHFVANSSILEAFEGESSVHVVDLGMTLGLpgghQWRQLIHSLANRATGPPkgRLKVTAIGL----HAQKLQAIGGELEV 349
                          **********************************9997644444*************9999889********....99************ PP

                 GRAS 168 fAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerf 257
                          +A++++v++ f+  + k le++++e++++ ++E+l+Vn+++qlh +++es    +   +vL+++ +l+Pk +v+veq+++hn++ Fl rf
  Kaladp0011s1026.1.p 350 YAHSMNVNMVFSG-INKCLENIRPEDFDIVEDEVLVVNSIFQLHCVVKESRGALN---SVLRIIHKLQPKTLVLVEQDSNHNGPFFLGRF 435
                          *************.7********************************88877777...8******************************* PP

                 GRAS 258 lealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.s 346
                          +eal+yysa+fdsl+a lp+ +  r+k+E+++++++i+n+v+ceg er+erhe++ +Wr+r+++aGF pvp++  + +qak  +++vk  
  Kaladp0011s1026.1.p 436 MEALHYYSAIFDSLDAMLPKYDTRRAKMEQFYFAEQIKNIVSCEGPERVERHERVDQWRRRMSRAGFLPVPIK--MISQAKQWMARVKlC 523
                          ***********************************************************************96..6899*********99 PP

                 GRAS 347 dgyrveeesgslvlgWkdrpLvsvSaWr 374
                          dg+++ ee+g+l+lgWk++p+v++S+W+
  Kaladp0011s1026.1.p 524 DGHTIVEEKGCLILGWKSKPIVAASCWK 551
                          ***************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 553 aa     Download sequence    
MANELAATNS FSEEISYHDD DDQFKALDLC LSALACYPYP FLPIPENSVA TSFSTTNNGN  60
AAAGATFLMP EEPGTGRDSK RLKRSFSVSE SLGSSDTNGC SSSYYGSASV EMSSRSLVRS  120
SSVTSLPRLH FRDHIWTYTQ RYLAAEAVEE AVSSFEAENG ISGEDHQGNK DGMRLVQLLI  180
ACAEAVACRD KSHASALLSE LRAHAVVFGS SFQRVASCFV QGLADRMTLL VQPLGSNGFR  240
SPATMLGLME GVESDKKAEG LSLVYELCPQ IQFGHFVANS SILEAFEGES SVHVVDLGMT  300
LGLPGGHQWR QLIHSLANRA TGPPKGRLKV TAIGLHAQKL QAIGGELEVY AHSMNVNMVF  360
SGINKCLENI RPEDFDIVED EVLVVNSIFQ LHCVVKESRG ALNSVLRIIH KLQPKTLVLV  420
EQDSNHNGPF FLGRFMEALH YYSAIFDSLD AMLPKYDTRR AKMEQFYFAE QIKNIVSCEG  480
PERVERHERV DQWRRRMSRA GFLPVPIKMI SQAKQWMARV KLCDGHTIVE EKGCLILGWK  540
SKPIVAASCW KC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.11e-78GRAS family protein