PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0011s1021.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 277aa    MW: 31720.4 Da    PI: 9.0062
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0011s1021.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.90.00033110133123
                          EEETTTTEEESSHHHHHHHHHH.T CS
              zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                          ++C++C+ksF    +L +H  + H
  Kaladp0011s1021.1.p 110 WRCGYCKKSFYAEKYLDQHFDNrH 133
                          58*****************76666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MAMTKVVATI LVLLSISSQS SVTVSSASIL NHGFKDVDEP ATGRTLKEDR HEVHCSRERS  60
RAAWKITEDY LMPFVEREKY QLSTKCRLHP DNDVYRDQEQ HKIHFDINEW RCGYCKKSFY  120
AEKYLDQHFD NRHYNLLNAS ESRCLADLCG ALHCDQVLNT KATKSKCNPA AAARNHHLCE  180
GLADSCFPAN EGPSASRLHE LFLRQFCDAH TCSGKYKPFP RGGKKQSGVF YLSISILTLM  240
LLPIFYLMVF LYQREMRNGT QELKRITKFG RKKKPS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63280.11e-122C2H2 family protein