PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0011s1017.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Protein Properties

Length: 638aa MW: 70164.8 Da PI: 8.8585

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0011s1017.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	55.3	1.2e-17	11	102	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 ffkv+ d ++ l+lp kf+ ++ ++ ++++ l+d+s r+W+v + +k g++ ++kGW++F ka++L+ gD+vvF++ + Kaladp0011s1017.1.p 11 FFKVM--IDEDFLRVLYLPPKFT-RIapDL--LKNTKTYLQDLSERKWNVAV--SKENGSFAIKKGWSDFGKAHNLEIGDIVVFHYFPGR 93 89999..555555679****9.674644..46678***********..99999************************87434 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 f +v++f++ Kaladp0011s1017.1.p 94 YF--TVQIFNR 102 55..8999887 PP
2	B3	40.7	4.1e-13	565	631	31	99
.--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 31 eesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 k ++l+d +r+W v + k+++ +lt+GW+ F +an+++ gD ++Fk+ ++e+++ v+++r+ Kaladp0011s1017.1.p 565 SDAKLVILRDAASRVWPVHY--YHKPSMKILTTGWSAFSQANKVQLGDECIFKVAPEEETTYDVSIVRQ 631 456789************..89999999*********************9877999999999885 PP

Sequence ? help Back to Top
Protein Sequence Length: 638 aa Download sequence
MGSLRETIVS FFKVMIDEDF LRVLYLPPKF TRIAPDLLKN TKTYLQDLSE RKWNVAVSKE 60 NGSFAIKKGW SDFGKAHNLE IGDIVVFHYF PGRYFTVQIF NRSACDVRNF GVDVGSTRKR 120 RRPEVIAADK NGKPAGNRDL DPLTAAPMES YKKGKREPAD FVVPMESNKR GKREPADFGD 180 ADIQFLMIDR NRVDEKREDR MVIDLSSYEM PNAEATSVIQ KAANGSPVPH AGVLVKHEAE 240 PGSTDAGNYD LPAADVVSVE QWAGNGPLIP HAGAVVQFKA EPGSMEVANL KQETKWDVVL 300 HESAKQMAID RSWHSDVKRE VHDTLAVGAP SRMTPMSPKY DAKSEVKKLS TAKPGYGAKT 360 RYAPAVVKIK KEPGIQTSEE TVIDLSDYKM STADVKGSKE RAGSRASALF AGSLVKCKAE 420 PGSAEVSNIK QEMQCNAELP ERMKPVEIRR SSYAVVNRKV CEYDTTVAPG HTAPLVPKCD 480 TNSDFLKLAT PKSGREAKTP YAPGQSGNAF VKVKKEPQTE TFEETGLAFV TAGAGDLHCP 540 ITSASSLFLE LPASLPLFRL TSQTSDAKLV ILRDAASRVW PVHYYHKPSM KILTTGWSAF 600 SQANKVQLGD ECIFKVAPEE ETTYDVSIVR QGSRPIS*

Sequence ? help Back to Top

Protein Sequence Length: 638 aa Download sequence

MGSLRETIVS FFKVMIDEDF LRVLYLPPKF TRIAPDLLKN TKTYLQDLSE RKWNVAVSKE  60
NGSFAIKKGW SDFGKAHNLE IGDIVVFHYF PGRYFTVQIF NRSACDVRNF GVDVGSTRKR  120
RRPEVIAADK NGKPAGNRDL DPLTAAPMES YKKGKREPAD FVVPMESNKR GKREPADFGD  180
ADIQFLMIDR NRVDEKREDR MVIDLSSYEM PNAEATSVIQ KAANGSPVPH AGVLVKHEAE  240
PGSTDAGNYD LPAADVVSVE QWAGNGPLIP HAGAVVQFKA EPGSMEVANL KQETKWDVVL  300
HESAKQMAID RSWHSDVKRE VHDTLAVGAP SRMTPMSPKY DAKSEVKKLS TAKPGYGAKT  360
RYAPAVVKIK KEPGIQTSEE TVIDLSDYKM STADVKGSKE RAGSRASALF AGSLVKCKAE  420
PGSAEVSNIK QEMQCNAELP ERMKPVEIRR SSYAVVNRKV CEYDTTVAPG HTAPLVPKCD  480
TNSDFLKLAT PKSGREAKTP YAPGQSGNAF VKVKKEPQTE TFEETGLAFV TAGAGDLHCP  540
ITSASSLFLE LPASLPLFRL TSQTSDAKLV ILRDAASRVW PVHYYHKPSM KILTTGWSAF  600
SQANKVQLGD ECIFKVAPEE ETTYDVSIVR QGSRPIS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	118	122	RKRRR
2	118	155	RKRRRPEVIAADKNGKPAGNRDLDPLTAAPMESYKKGK
3	119	156	RKRRRPEVIAADKNGKPAGNRDLDPLTAAPMESYKKGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49475.1	7e-09	B3 family protein