PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0011s1015.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 991aa MW: 110243 Da PI: 8.728

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0011s1015.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.3	0.00012	898	920	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 Cp Cgk+F ++ +L +H r+H Kaladp0011s1015.2.p 898 CPvtGCGKTFFSHKYLLQHRRVH 920 9999*****************99 PP
2	zf-C2H2	11.4	0.001	956	982	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 y C Cg++F+ s++ rH r+ H Kaladp0011s1015.2.p 956 YMCAepGCGQTFRFVSDFSRHKRKtgH 982 789999****************99666 PP

Sequence ? help Back to Top
Protein Sequence Length: 991 aa Download sequence
MSPEVFVKAG IPCCRLVQNP GEFVVTFPRA YHSGFSHGFN CGEASNIATP YWLAVAKEAA 60 VRRASINYPP MVSHFQLLYD LAFALCSSLP MGVHSQPRSS RLKQKRKGVG ETVVKQLFVE 120 DIKESNRLLQ LLGEGLPVVL RPLSSAVFSI YSKSRIQCLL KSRSSSHLGL CYQKETVTSI 180 RNNLATSDIN SGTNGRLPTV IGLPAVGSKF CSTFDGNSRS LPNESTEPQL STSSRWVTDF 240 ENSNAIQDNG ASDKKLFSCV TCGILCFSCV AIIQPAEVAA RYLMASDCSF FSDSENAAKK 300 TSEELADSGR GVNTLDHTYS SGWMGRRAHN GTSNHIEEEY QSDEANSDRE EQPRTTALDL 360 LASAYGNSSD SENDTRLDSD PVYADGPNFS KISSDSDFEC NDSDIRDPLQ ENDFRWESSP 420 RLHSEGETTR FHIADSDGEN HYRRAFQNRN STYDSPSFNL DKLASMGSNL ASLQSDKDSL 480 RMHVFCLEHA IEVKKKLKQI GGVNMLLLCH PDYPRVEAEA KSVQEELGLD HCWNDTAFRE 540 SSEDDERCMA AALESAEDVS SNGDWTVKLG INLFYSASLS RSPLYSKQMP YNSIVYKAFG 600 RVPPLEAPAK SDGHTKGNSR KKKIVLAGKW CGKPWMSNQV HPLLLPPPPA LEETQQEHLH 660 AHASAKTDAA DSDSIQPVKS SKARRDDSSA TTSTPLAGSK RQIVVYSRSN KKTKRAETGL 720 SVSASDGGDA DAGENLSNQQ AKLHVRSKHK IEGNKKPLEE ETRILYYSSK HVAKGDLKST 780 KETTSLRDLY KPNFKPFGAD LDDKREGGLS TRLRRRNTKP ELEHEGKVLV KKERKPNKTP 840 ANSKIEKVDA KPRKSKVSEA ARSRKKKDEE GEFQCDKEGC TMSFSLKQEL ALHKRDICPV 900 TGCGKTFFSH KYLLQHRRVH EDARPLKCPW KGCKMTFKWA WARTEHIRVH TGVRPYMCAE 960 PGCGQTFRFV SDFSRHKRKT GHSVKRNIKC *

Sequence ? help Back to Top

Protein Sequence Length: 991 aa Download sequence

MSPEVFVKAG IPCCRLVQNP GEFVVTFPRA YHSGFSHGFN CGEASNIATP YWLAVAKEAA  60
VRRASINYPP MVSHFQLLYD LAFALCSSLP MGVHSQPRSS RLKQKRKGVG ETVVKQLFVE  120
DIKESNRLLQ LLGEGLPVVL RPLSSAVFSI YSKSRIQCLL KSRSSSHLGL CYQKETVTSI  180
RNNLATSDIN SGTNGRLPTV IGLPAVGSKF CSTFDGNSRS LPNESTEPQL STSSRWVTDF  240
ENSNAIQDNG ASDKKLFSCV TCGILCFSCV AIIQPAEVAA RYLMASDCSF FSDSENAAKK  300
TSEELADSGR GVNTLDHTYS SGWMGRRAHN GTSNHIEEEY QSDEANSDRE EQPRTTALDL  360
LASAYGNSSD SENDTRLDSD PVYADGPNFS KISSDSDFEC NDSDIRDPLQ ENDFRWESSP  420
RLHSEGETTR FHIADSDGEN HYRRAFQNRN STYDSPSFNL DKLASMGSNL ASLQSDKDSL  480
RMHVFCLEHA IEVKKKLKQI GGVNMLLLCH PDYPRVEAEA KSVQEELGLD HCWNDTAFRE  540
SSEDDERCMA AALESAEDVS SNGDWTVKLG INLFYSASLS RSPLYSKQMP YNSIVYKAFG  600
RVPPLEAPAK SDGHTKGNSR KKKIVLAGKW CGKPWMSNQV HPLLLPPPPA LEETQQEHLH  660
AHASAKTDAA DSDSIQPVKS SKARRDDSSA TTSTPLAGSK RQIVVYSRSN KKTKRAETGL  720
SVSASDGGDA DAGENLSNQQ AKLHVRSKHK IEGNKKPLEE ETRILYYSSK HVAKGDLKST  780
KETTSLRDLY KPNFKPFGAD LDDKREGGLS TRLRRRNTKP ELEHEGKVLV KKERKPNKTP  840
ANSKIEKVDA KPRKSKVSEA ARSRKKKDEE GEFQCDKEGC TMSFSLKQEL ALHKRDICPV  900
TGCGKTFFSH KYLLQHRRVH EDARPLKCPW KGCKMTFKWA WARTEHIRVH TGVRPYMCAE  960
PGCGQTFRFV SDFSRHKRKT GHSVKRNIKC *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48430.1	1e-158	C2H2 family protein