PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0011s1015.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 1291aa MW: 143280 Da PI: 8.9324

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0011s1015.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.9	0.00016	1198	1220	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 Cp Cgk+F ++ +L +H r+H Kaladp0011s1015.1.p 1198 CPvtGCGKTFFSHKYLLQHRRVH 1220 9999*****************99 PP
2	zf-C2H2	10.9	0.0014	1256	1282	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 y C Cg++F+ s++ rH r+ H Kaladp0011s1015.1.p 1256 YMCAepGCGQTFRFVSDFSRHKRKtgH 1282 789999****************99666 PP

Sequence ? help Back to Top
Protein Sequence Length: 1291 aa Download sequence
MSGKQQQAEV FQWLRALPVA PEYRPTLDEF QDPIAYIFKI EKEASRYGIC KIVPPLPPAP 60 RKTVVANFNK SVPNGSGARP TFTTRQQQIG FCPRRGRPVQ RPVWQSGEFY TFQEFEAKAR 120 AFERSYLKKC GKKAAVAAAA AAGPGLSALE IETLYWKASA DKPFSVEYAN DMPGSAFAAA 180 SGTGRRPREG GEGMTVGDTA WNMKGVARST MSLLRFMKED IAGVTSPMVY VAMLFSWFAW 240 HVEDHDLHSL NYLHTGAGKT WYGVPKEAAA GFEEVVRVHG YGGEINPLVT FATLGEKTTV 300 MSPEVFVKAG IPCCRLVQNP GEFVVTFPRA YHSGFSHGFN CGEASNIATP YWLAVAKEAA 360 VRRASINYPP MVSHFQLLYD LAFALCSSLP MGVHSQPRSS RLKQKRKGVG ETVVKQLFVE 420 DIKESNRLLQ LLGEGLPVVL RPLSSAVFSI YSKSRIQCLL KSRSSSHLGL CYQKETVTSI 480 RNNLATSDIN SGTNGRLPTV IGLPAVGSKF CSTFDGNSRS LPNESTEPQL STSSRWVTDF 540 ENSNAIQDNG ASDKKLFSCV TCGILCFSCV AIIQPAEVAA RYLMASDCSF FSDSENAAKK 600 TSEELADSGR GVNTLDHTYS SGWMGRRAHN GTSNHIEEEY QSDEANSDRE EQPRTTALDL 660 LASAYGNSSD SENDTRLDSD PVYADGPNFS KISSDSDFEC NDSDIRDPLQ ENDFRWESSP 720 RLHSEGETTR FHIADSDGEN HYRRAFQNRN STYDSPSFNL DKLASMGSNL ASLQSDKDSL 780 RMHVFCLEHA IEVKKKLKQI GGVNMLLLCH PDYPRVEAEA KSVQEELGLD HCWNDTAFRE 840 SSEDDERCMA AALESAEDVS SNGDWTVKLG INLFYSASLS RSPLYSKQMP YNSIVYKAFG 900 RVPPLEAPAK SDGHTKGNSR KKKIVLAGKW CGKPWMSNQV HPLLLPPPPA LEETQQEHLH 960 AHASAKTDAA DSDSIQPVKS SKARRDDSSA TTSTPLAGSK RQIVVYSRSN KKTKRAETGL 1020 SVSASDGGDA DAGENLSNQQ AKLHVRSKHK IEGNKKPLEE ETRILYYSSK HVAKGDLKST 1080 KETTSLRDLY KPNFKPFGAD LDDKREGGLS TRLRRRNTKP ELEHEGKVLV KKERKPNKTP 1140 ANSKIEKVDA KPRKSKVSEA ARSRKKKDEE GEFQCDKEGC TMSFSLKQEL ALHKRDICPV 1200 TGCGKTFFSH KYLLQHRRVH EDARPLKCPW KGCKMTFKWA WARTEHIRVH TGVRPYMCAE 1260 PGCGQTFRFV SDFSRHKRKT GHSVKRNIKC *

Sequence ? help Back to Top

Protein Sequence Length: 1291 aa Download sequence

MSGKQQQAEV FQWLRALPVA PEYRPTLDEF QDPIAYIFKI EKEASRYGIC KIVPPLPPAP  60
RKTVVANFNK SVPNGSGARP TFTTRQQQIG FCPRRGRPVQ RPVWQSGEFY TFQEFEAKAR  120
AFERSYLKKC GKKAAVAAAA AAGPGLSALE IETLYWKASA DKPFSVEYAN DMPGSAFAAA  180
SGTGRRPREG GEGMTVGDTA WNMKGVARST MSLLRFMKED IAGVTSPMVY VAMLFSWFAW  240
HVEDHDLHSL NYLHTGAGKT WYGVPKEAAA GFEEVVRVHG YGGEINPLVT FATLGEKTTV  300
MSPEVFVKAG IPCCRLVQNP GEFVVTFPRA YHSGFSHGFN CGEASNIATP YWLAVAKEAA  360
VRRASINYPP MVSHFQLLYD LAFALCSSLP MGVHSQPRSS RLKQKRKGVG ETVVKQLFVE  420
DIKESNRLLQ LLGEGLPVVL RPLSSAVFSI YSKSRIQCLL KSRSSSHLGL CYQKETVTSI  480
RNNLATSDIN SGTNGRLPTV IGLPAVGSKF CSTFDGNSRS LPNESTEPQL STSSRWVTDF  540
ENSNAIQDNG ASDKKLFSCV TCGILCFSCV AIIQPAEVAA RYLMASDCSF FSDSENAAKK  600
TSEELADSGR GVNTLDHTYS SGWMGRRAHN GTSNHIEEEY QSDEANSDRE EQPRTTALDL  660
LASAYGNSSD SENDTRLDSD PVYADGPNFS KISSDSDFEC NDSDIRDPLQ ENDFRWESSP  720
RLHSEGETTR FHIADSDGEN HYRRAFQNRN STYDSPSFNL DKLASMGSNL ASLQSDKDSL  780
RMHVFCLEHA IEVKKKLKQI GGVNMLLLCH PDYPRVEAEA KSVQEELGLD HCWNDTAFRE  840
SSEDDERCMA AALESAEDVS SNGDWTVKLG INLFYSASLS RSPLYSKQMP YNSIVYKAFG  900
RVPPLEAPAK SDGHTKGNSR KKKIVLAGKW CGKPWMSNQV HPLLLPPPPA LEETQQEHLH  960
AHASAKTDAA DSDSIQPVKS SKARRDDSSA TTSTPLAGSK RQIVVYSRSN KKTKRAETGL  1020
SVSASDGGDA DAGENLSNQQ AKLHVRSKHK IEGNKKPLEE ETRILYYSSK HVAKGDLKST  1080
KETTSLRDLY KPNFKPFGAD LDDKREGGLS TRLRRRNTKP ELEHEGKVLV KKERKPNKTP  1140
ANSKIEKVDA KPRKSKVSEA ARSRKKKDEE GEFQCDKEGC TMSFSLKQEL ALHKRDICPV  1200
TGCGKTFFSH KYLLQHRRVH EDARPLKCPW KGCKMTFKWA WARTEHIRVH TGVRPYMCAE  1260
PGCGQTFRFV SDFSRHKRKT GHSVKRNIKC *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48430.1	0.0	C2H2 family protein