PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0011s0817.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

SRS

Protein Properties

Length: 347aa MW: 35577.6 Da PI: 8.0707

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0011s0817.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	201.8	2e-62	120	279	4	154
DUF702 4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklss 93 +++CqdCGnqakkdC+h+RCRtCCksrg+dC+thvkstWvpa++rrerq ++++ +++a+ + +a s k+ ++++a+s+t+ s+ Kaladp0011s0817.1.p 120 SSSTCQDCGNQAKKDCSHRRCRTCCKSRGYDCSTHVKSTWVPASRRRERQLLASSTGASSASMSLSAGSGVKKARLVSSNAATSHTSNSN 209 5689*******************************************98888888888877777777777777777777777777555 PP DUF702 94 aeskkeletss..........lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 ++++++et+s lP ++ ++a f+cv+v+s++dg++e+aYq+ v+igGhvfkG+LydqG e+ Kaladp0011s0817.1.p 210 -TPPRSFETTSchqdptfketLPGQILAPATFKCVKVTSINDGDDEFAYQAMVKIGGHVFKGFLYDQGEES 279 .56778888888899***************************************************875 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MWPPSSAARV LNYSIPHDMG MVGLRDLFVV APASSFHHSS LNEPNLMAEG LGGGNPATAL 60 GVGLGVIPLL TAAPCIADDG GVNGRSSRGG GGIQLWQNPG LNGGNNNNAS VMQTMGASSS 120 SSTCQDCGNQ AKKDCSHRRC RTCCKSRGYD CSTHVKSTWV PASRRRERQL LASSTGASSA 180 SMSLSAGSGV KKARLVSSNA ATSHTSNSNT PPRSFETTSC HQDPTFKETL PGQILAPATF 240 KCVKVTSIND GDDEFAYQAM VKIGGHVFKG FLYDQGEESG TREHQQPGMP NISDLHLGGG 300 NGGGGMHKVS CSTTGLEAPL ADVYGGGSTS GGGILGGSGY GNPIIN*

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MWPPSSAARV LNYSIPHDMG MVGLRDLFVV APASSFHHSS LNEPNLMAEG LGGGNPATAL  60
GVGLGVIPLL TAAPCIADDG GVNGRSSRGG GGIQLWQNPG LNGGNNNNAS VMQTMGASSS  120
SSTCQDCGNQ AKKDCSHRRC RTCCKSRGYD CSTHVKSTWV PASRRRERQL LASSTGASSA  180
SMSLSAGSGV KKARLVSSNA ATSHTSNSNT PPRSFETTSC HQDPTFKETL PGQILAPATF  240
KCVKVTSIND GDDEFAYQAM VKIGGHVFKG FLYDQGEESG TREHQQPGMP NISDLHLGGG  300
NGGGGMHKVS CSTTGLEAPL ADVYGGGSTS GGGILGGSGY GNPIIN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G12330.4	1e-67	SRS family protein