PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0011s0744.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 338aa    MW: 37587.5 Da    PI: 5.5426
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0011s0744.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.26.6e-171461148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         +g+WT+eEd  lv +++++G+g+W++++   g+ R+ k+c++rw +yl
  Kaladp0011s0744.1.p 14 KGPWTPEEDIVLVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNYL 61
                         79******************************99************97 PP
2Myb_DNA-binding45.71.5e-1467112148
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                          rg++T+ E+  ++++ ++lG++ W++Ia++++  Rt++++k++w+++l
  Kaladp0011s0744.1.p  67 RGNFTPHEEGMIIHLQALLGNK-WAAIASYLP-QRTDNDIKNYWNTHL 112
                          89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MGRPPCCDKD GVKKGPWTPE EDIVLVSYIQ EHGPGNWRSV PTNTGLLRCS KSCRLRWTNY  60
LRPGIKRGNF TPHEEGMIIH LQALLGNKWA AIASYLPQRT DNDIKNYWNT HLKKKLNRYQ  120
TAEQPHHHFN SYPSNTGVAA AAASSTTSSS NGVITCVRNN NNSPSPLLHA TTNSSSLSAS  180
SCYYASSTEN ISRLLEGWMR ASPKTNNKLI RRSSEHGSCE DVVVGMEDDA VVEEPNKDDN  240
DDDDDDPLMF KEGISLYGNM DGGSSHDMMW AKATSECFDK EMMKQDNEDG NESIHQQDHS  300
NSNNNPPFSI FEKWLLEESS HGGGGQVEEM MQLSPIF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08810.11e-91MYB family protein