PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0011s0429.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 236aa MW: 26673 Da PI: 9.8574 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.3 | 2.3e-15 | 34 | 81 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W +eEd +l++ ++ G + W++Ia+ g++R++k+c++rw +yl Kaladp0011s0429.1.p 34 KGAWRPEEDHILAETIAIRGAKKWSKIAALAGLNRCGKSCRLRWMNYL 81 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 49.2 | 1.2e-15 | 87 | 132 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +++E++l+++++k+lG++ W++Ia +++ gRt++++k++w+++l Kaladp0011s0429.1.p 87 RGDISAQEEDLILRLHKLLGNR-WALIAGRLP-GRTDNEIKNYWNSHL 132 677799****************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MGQVDDNKES NSSKKDEATI AKKATKPKQR AMSKGAWRPE EDHILAETIA IRGAKKWSKI 60 AALAGLNRCG KSCRLRWMNY LRPNIKRGDI SAQEEDLILR LHKLLGNRWA LIAGRLPGRT 120 DNEIKNYWNS HLSKRMRDAN GQDPERRSRS TNVKNYEDSQ GPSSSIARSN VKVNHHTNPS 180 IIAQEADQPH TKLLIENNKN EMMANSFGAS EFEFLSEGFF ELDWISSFLE FDGCS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G35550.1 | 1e-51 | MYB family protein |