PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0009s0063.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 308aa    MW: 34179.5 Da    PI: 6.492
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0009s0063.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.33.2e-171461148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         rg WT+eEd +++ +v+ +G g+W++++++ g++R++k+c++rw +yl
  Kaladp0009s0063.1.p 14 RGLWTAEEDAKILAYVASHGVGNWTLVPQKAGLNRCGKSCRLRWTNYL 61
                         788*******************************************97 PP
2Myb_DNA-binding44.53.5e-1470110446
                          S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
      Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                          +T+eE++ ++++++  G++ W++Ia+ ++ gRt++++k++w++
  Kaladp0009s0063.1.p  70 FTAEEEDYIIELHRAVGSR-WSLIAKQLP-GRTDNDVKNYWNT 110
                          8******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MGRPPCCDKS NVKRGLWTAE EDAKILAYVA SHGVGNWTLV PQKAGLNRCG KSCRLRWTNY  60
LRPDLKHEGF TAEEEDYIIE LHRAVGSRWS LIAKQLPGRT DNDVKNYWNT KLKKKLVSMG  120
IDPITHKPIS RVVTDCHNII NLTTQAASYN RLRDQASLTM SNPCFFPSAP CFSDFNCQAL  180
MQTYVPQSPT ASSSSSSCTV NQPVESFPAS TAQVYSFSWI DHVLQDNWCI NDDLDQSQGG  240
FSDMPVSAGL KLGEADAEKS KTVGATCNPS KAYSSSCSVK TFVDNILDRD FEIMSDCPRL  300
LDESFEY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28470.13e-81MYB family protein