PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0008s0197.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 177aa MW: 18596.5 Da PI: 9.822 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50 | 7.2e-16 | 27 | 76 | 1 | 54 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 +++kG+r++k +g+Wv+eIr+p + r +lg++ tae Aa+a++ a +l+ Kaladp0008s0197.1.p 27 KKFKGIRRRK-WGKWVSEIRVPG----TpNRLWLGSYSTAEAAAAAHDVASFYLR 76 59*****998.**********82....589******************9998887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence |
MSNSSSSGGG GGGASEQQSK VLMSKQKKFK GIRRRKWGKW VSEIRVPGTP NRLWLGSYST 60 AEAAAAAHDV ASFYLRSSPT VEGLKEGSDV MSLSPRSVQK AASDAGMAVD AAHRVVLMQQ 120 SGGNGTSNNN GSHSRDVPVD SGREENWSFG GSWMVGDNNG GKCKPSDLNI SVDDYL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22810.1 | 4e-23 | ERF family protein |