PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0005s0030.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 207aa    MW: 22860.1 Da    PI: 8.2288
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0005s0030.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2110.00144264123
                         EEETTTTEEESSHHHHHHHHHHT CS
              zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                         ++C  C k+F++   L  H  +H
  Kaladp0005s0030.1.p 42 FECRTCRKRFTTFQALGGHRASH 64
                         89**********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MSSSCEETPS KPTVETAATC LMLLSKLDES HAQPSRDDIR AFECRTCRKR FTTFQALGGH  60
RASHKKPKPD HDSFFQSKNT TVTPPRPKAH ECAICGAEFA LGQALGGHMR RHRDGANGVV  120
LGSGSGDTTA FGEVHVMGER VCLKMDLNLT PGENELQMCV PDLKLQLGKR EYEIRMESGT  180
VQEYDLWTQL RKRRRFGEAL LGLVAL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1191195RKRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59820.13e-31C2H2 family protein