PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0003s0053.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

SRS

Protein Properties

Length: 358aa MW: 39371.3 Da PI: 7.8426

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0003s0053.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	194.3	4.2e-60	136	289	3	154
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstkls 92 g+++CqdCGnqakkdC h RCRtCCksrgf+C+th+kstWvpa+krrerqqqla+++++++++ + +++ + ++ + l++t++s Kaladp0003s0053.1.p 136 GGGMNCQDCGNQAKKDCPHLRCRTCCKSRGFQCQTHIKSTWVPASKRRERQQQLASLQQQQSQQLQLRSHDITL---KRPRGELTTTNTS 222 5789**************************************************988876654332222222...2233333333322 PP DUF702 93 saeskkeletsslPeevsseavfrcvrvssvd..........dgeeelaYqtavsigGhvfkGiLydqGlee 154 + +P+ev+s+avfrcvrvss+d ++++aYq+avsigGhvfkGiLydqG+e+ Kaladp0003s0053.1.p 223 G-----LDLSNMFPSEVNSQAVFRCVRVSSMDpehnaneehgHHDDQFAYQAAVSIGGHVFKGILYDQGPES 289 2.....223355***************8544443322123689*********************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MAGFFSSLSG GVRDEQEEEH DQQQPPPAAA NSLFLYRSEE IYKQQQGLEI WQQQQFYRQQ 60 QLQQQQQQQQ QQYLPRDQHH HHHHIISYAA AAAPPPSLMA PTSSRRLSFN VSSDASSSRS 120 GGGGFTVMRG SGSGSGGGMN CQDCGNQAKK DCPHLRCRTC CKSRGFQCQT HIKSTWVPAS 180 KRRERQQQLA SLQQQQSQQL QLRSHDITLK RPRGELTTTN TSGLDLSNMF PSEVNSQAVF 240 RCVRVSSMDP EHNANEEHGH HDDQFAYQAA VSIGGHVFKG ILYDQGPESR YGESSSGGSG 300 AYQQPQQQLN LITSGAAATA ATSSPVVTTQ LLDASLNYPT PINAFMAGTQ FFPPSRS*

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MAGFFSSLSG GVRDEQEEEH DQQQPPPAAA NSLFLYRSEE IYKQQQGLEI WQQQQFYRQQ  60
QLQQQQQQQQ QQYLPRDQHH HHHHIISYAA AAAPPPSLMA PTSSRRLSFN VSSDASSSRS  120
GGGGFTVMRG SGSGSGGGMN CQDCGNQAKK DCPHLRCRTC CKSRGFQCQT HIKSTWVPAS  180
KRRERQQQLA SLQQQQSQQL QLRSHDITLK RPRGELTTTN TSGLDLSNMF PSEVNSQAVF  240
RCVRVSSMDP EHNANEEHGH HDDQFAYQAA VSIGGHVFKG ILYDQGPESR YGESSSGGSG  300
AYQQPQQQLN LITSGAAATA ATSSPVVTTQ LLDASLNYPT PINAFMAGTQ FFPPSRS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66350.1	4e-48	SRS family protein