PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019200470.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 605aa    MW: 66907.7 Da    PI: 4.7636
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019200470.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM171.13.5e-53211491128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                     lp+GfrFhPtdeel+++yLk k++g+k e+ +vi+e+di+k+ePwdLp  +++++ ++ew+fF++ d+ky++g+r nrat++gyWkatgkd+++l
  XP_019200470.1  21 LPVGFRFHPTDEELINHYLKLKINGSKAEV-SVIREIDICKLEPWDLPdlSMIESYDNEWFFFCPIDRKYQNGQRMNRATERGYWKATGKDRNIL 114
                     79*************************999.99**************96448888999************************************* PP

             NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     ++++ ++g+kktLv+ykgrap+g++++Wv+heyr+
  XP_019200470.1 115 TRNRVKIGMKKTLVYYKGRAPDGKRSNWVIHEYRA 149
                     *********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 605 aa     Download sequence    
MAVLPLERST TTTVLPPLSS LPVGFRFHPT DEELINHYLK LKINGSKAEV SVIREIDICK  60
LEPWDLPDLS MIESYDNEWF FFCPIDRKYQ NGQRMNRATE RGYWKATGKD RNILTRNRVK  120
IGMKKTLVYY KGRAPDGKRS NWVIHEYRAT DKALDGTQPG QTPYVLCRLF KKNELKQDEN  180
AESPNSNGVE PNVSSPAVVK SPGEDDQSET VTPMGSYHIK AQPLTPEKSS VEESPIAQLP  240
VDSNSISSNA NNAEEDLDIL HDPDLEEALT YLYEPSEEDF NIFSLPQTEM QGLGSSYAYN  300
AVTTNCGDDM YIQSLSETNI SDENEFMNSF LVSSDEIPYG DSVQQILSIE HATPNYVSTI  360
NKPSEAEMMQ GLVNTGFFEN VPANALLQRH VDHVPNPSGG VYTPHTFNGG PEKWNSDPLK  420
NNYPGQDVFS TMCDGSQAVN MVNLGGEGGS VNAVSSFGTG IRLRTRQARS QTADQPFTMQ  480
GTAPRRIRLQ MSFPAASVQS RLPEDSNQAE SEKSALTEGE TIDSTATSSL ETRDIIARAF  540
KRDGEISKNT STKTKDKEGF AACSNGNTIS VFSKTGLLHS VYMPKVLIAV SLLLVLVGSL  600
AYIRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24590.26e-76NAC family protein