PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019200257.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | ERF | ||||||||
Protein Properties | Length: 249aa MW: 26969.8 Da PI: 4.8072 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.8 | 2.4e-17 | 45 | 94 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y GVr + +g+Wv+eIr+p++ + r++lg+f t+e+Aa+a++ a+ +++g XP_019200257.1 45 SYVGVRMRA-WGKWVSEIREPKK---KSRIWLGTFATPEMAARAHDVAAMSIKG 94 79****998.**********854...6**********************99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MAEPPFCHET ELSTSNSSWS RSKRPREDAG GGGKSGRRSD LKHPSYVGVR MRAWGKWVSE 60 IREPKKKSRI WLGTFATPEM AARAHDVAAM SIKGDTALLN FPALAGLLPR PASSTPRDVR 120 AAAVKAAHMD HLDPPKPPSS SSSLASSPSS SSLVSTVTSG EDASTPPQEE EDDDAPPSPA 180 ELGEIVELPE LRDNTEPTRD EFIFVDSYGW DFCHPWSHLD DCGYYATAVA GDGFDAVLSG 240 DFDSCLWQH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G32800.1 | 6e-46 | ERF family protein |