PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019199872.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 334aa MW: 37532.9 Da PI: 8.4638

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019199872.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	171.9	2e-53	16	142	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL +kv ++++++ +i+evd++kvePwdLp k++ +ekewyfF+ rdkky+tg r+nrat +gyWkatgkdke+++ XP_019199872.1 16 LPPGFRFHPTDEELITHYLSNKVLDSTFSA-IAIAEVDMNKVEPWDLPWKARIGEKEWYFFCVRDKKYPTGLRTNRATVAGYWKATGKDKEIFR- 108 79***********************999.88***********888999************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 ++ lvg+kktLvfy grapkg kt+Wv heyrle XP_019199872.1 109 GKCLVGMKKTLVFYMGRAPKGLKTNWVSHEYRLE 142 999***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 334 aa Download sequence
MVMEKLCEGV GEQMELPPGF RFHPTDEELI THYLSNKVLD STFSAIAIAE VDMNKVEPWD 60 LPWKARIGEK EWYFFCVRDK KYPTGLRTNR ATVAGYWKAT GKDKEIFRGK CLVGMKKTLV 120 FYMGRAPKGL KTNWVSHEYR LEGQLSLQNL NKPSKVQNDW VLCRVFQKSS GGKKVHISGM 180 IRCNYPTGNA PQNSPLLPPL SDSPPCHGGA AKATSYVHCF SSKQQEMNMN MLNFSPLPIS 240 PIIPNTFTTT TTTNSLQIPL IPMQDPATLR NWLANYGFKT ENKEIASGVS QETGLSTDIN 300 TEISSVGKRC FQDHQDPPST PPPGPQDFDC LWSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-107	NAC family protein