PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019199826.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | NAC | ||||||||
Protein Properties | Length: 273aa MW: 30881.9 Da PI: 9.8189 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 162.5 | 1.6e-50 | 14 | 138 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelvv+yLk+kv + +l++ ++i+++d++k++PwdLp e+e yfFs+r+ ky++g+r++rat sgyWkatg dk++ s XP_019199826.1 14 LPPGFRFHPTDEELVVQYLKRKVFSCPLPA-SIIPDFDVCKSDPWDLPGD---WEQERYFFSTREVKYPNGNRSSRATGSGYWKATGIDKQIASC 104 79****************************.89***************44...46799**********************************997 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++lvg+kktLvfykg+ap+g++tdW+mheyrl XP_019199826.1 105 rGRQLVGMKKTLVFYKGKAPHGSRTDWIMHEYRL 138 57778***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 273 aa Download sequence |
MEKMSFVKNG VLRLPPGFRF HPTDEELVVQ YLKRKVFSCP LPASIIPDFD VCKSDPWDLP 60 GDWEQERYFF STREVKYPNG NRSSRATGSG YWKATGIDKQ IASCRGRQLV GMKKTLVFYK 120 GKAPHGSRTD WIMHEYRLAN APTSLQPPNN NNNNNVKTTT LNSFSTTFKC LLTHLFSNFL 180 QENWVLCRIF LKKRTAKKED ETTEMNRGAS LGNGTKPVFY DFLARERADL NLAPASSSSG 240 SSGVTVLSSN HQTSDDHEES SSCSSFTTLR RKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13180.1 | 9e-96 | NAC family protein |