PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019199407.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family B3
Protein Properties Length: 416aa    MW: 46348.8 Da    PI: 5.369
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019199407.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B355.69.7e-1864153299
                     EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                     +k +++s+++   +l lpkkf+++h  +   +  ++l de+g+++e ++ ++k++    l++GW++F  a++L +gD+vvF+l++   f+++v +
  XP_019199407.1  64 VKFMLHSHTTGGFWLGLPKKFCASHLPN--HNAAIVLVDENGEEMETRYLVQKCG----LSAGWRGFSLAHNLIAGDVVVFQLIE--PFKMKVYI 150
                     6889999******************534..4558***************555555....9**********************985..99999999 PP

                     E-S CS
              B3  97 frk 99 
                     +r+
  XP_019199407.1 151 VRE 153
                     986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 416 aa     Download sequence    
MKALTDNKKV VNRGSPPLKK SKMLVKARSE VVKKEYMCVD ENSLAMRRAQ ELQANLSPEF  60
PSLVKFMLHS HTTGGFWLGL PKKFCASHLP NHNAAIVLVD ENGEEMETRY LVQKCGLSAG  120
WRGFSLAHNL IAGDVVVFQL IEPFKMKVYI VRENGLTDVA GAISLLNLSH SAQPIASEGL  180
LQQNEDTKEN VMRICDPADQ GDDQQGEIST SDHFLESNLS GNDIDNNSPR TSSNGLRFAE  240
AVVDFAQVED FEGFNIVVNN IVIDSEIPEA HRLKYYELCC SRKAYLHESL LDGLNYKLIA  300
GAITETVNIA DAIRAARLTT GCELLEVWDA TLRGIEQFGI QVGFLRDRIS KLVRLSGDVV  360
ASKKKEKAVA EAEMTDLRGK MWRVREVIDN LDTEIQAYSS KERVEELFKD AANAAW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.14e-39B3 family protein