PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019199361.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

TALE

Protein Properties

Length: 707aa MW: 75768.5 Da PI: 7.4439

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019199361.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.8	2.2e-09	393	430	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt +qV++WF N R + XP_019199361.1 393 FEHflHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVR 430 664459******************************88 PP
2	BELL	114.3	6.2e-37	261	332	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +rq+lq+kkakLls+++eV++rY+qy++q+q++++sFe++ag+gsa++Yt+lAl++iS++FrcLk aia+qi XP_019199361.1 261 QRQDLQMKKAKLLSMVDEVEQRYRQYHHQMQVIVASFEQAAGVGSARSYTHLALNTISKQFRCLKVAIASQI 332 699********************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 707 aa Download sequence
MAMYYQGSSE VQGDGLQTLY LMNPNYIGFS DTALPQSQQA MFLNSGNALH AGGMPHARLP 60 QSQHFVGVPL PASALGSAQL HDPARSLWAG LEQAGSGSGG QQIPSAVVSG GGGTTDFASQ 120 LGFHRSVVVS PTAQQGLSLS LSPQQHPFRS LPMESPVGLL SARPGAAHDN SGASSSSITH 180 GISGFITGSK YLKAAQELLD EVVNVEKSLK LDAAEEAANK EKAKMKKESM PPFGGCGGDP 240 PTSGGESSAQ KTAAAELTTA QRQDLQMKKA KLLSMVDEVE QRYRQYHHQM QVIVASFEQA 300 AGVGSARSYT HLALNTISKQ FRCLKVAIAS QIKATSKSLG EEEGVRGSRL KFIDHHLPQQ 360 RALQHLGMMQ PNAWRPQRGL PERAVSVLRA WLFEHFLHPY PKDSDKIMLA KQTGLTRSQV 420 SNWFINARVR LWKPMVEEMY TEEMKGQEQY GGSGENAAAA GKRNEANKEI GSNNSTEKQE 480 KTSNIQDNNN NNNASPTEIS TSIMTASPTG VSSLQPQGGG GGAFSFINTL NMENAGERNG 540 KKPRNDNIQS SPSSILSVDM DMKSAAGEAN KGYNHHKFTA DRTPAAAAEN FPDLMAAANT 600 GGFGGFTIGD FGRFNPENLT AGFHHGNGVS LTLGLPPSEN LAVSGSQQNY LSTHQDMELG 660 RRLEMGRMGI DNNPQPSSHS NINGGYETID FQNGKRFAAQ LLPDFVA

Sequence ? help Back to Top

Protein Sequence Length: 707 aa Download sequence

MAMYYQGSSE VQGDGLQTLY LMNPNYIGFS DTALPQSQQA MFLNSGNALH AGGMPHARLP  60
QSQHFVGVPL PASALGSAQL HDPARSLWAG LEQAGSGSGG QQIPSAVVSG GGGTTDFASQ  120
LGFHRSVVVS PTAQQGLSLS LSPQQHPFRS LPMESPVGLL SARPGAAHDN SGASSSSITH  180
GISGFITGSK YLKAAQELLD EVVNVEKSLK LDAAEEAANK EKAKMKKESM PPFGGCGGDP  240
PTSGGESSAQ KTAAAELTTA QRQDLQMKKA KLLSMVDEVE QRYRQYHHQM QVIVASFEQA  300
AGVGSARSYT HLALNTISKQ FRCLKVAIAS QIKATSKSLG EEEGVRGSRL KFIDHHLPQQ  360
RALQHLGMMQ PNAWRPQRGL PERAVSVLRA WLFEHFLHPY PKDSDKIMLA KQTGLTRSQV  420
SNWFINARVR LWKPMVEEMY TEEMKGQEQY GGSGENAAAA GKRNEANKEI GSNNSTEKQE  480
KTSNIQDNNN NNNASPTEIS TSIMTASPTG VSSLQPQGGG GGAFSFINTL NMENAGERNG  540
KKPRNDNIQS SPSSILSVDM DMKSAAGEAN KGYNHHKFTA DRTPAAAAEN FPDLMAAANT  600
GGFGGFTIGD FGRFNPENLT AGFHHGNGVS LTLGLPPSEN LAVSGSQQNY LSTHQDMELG  660
RRLEMGRMGI DNNPQPSSHS NINGGYETID FQNGKRFAAQ LLPDFVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35940.1	1e-111	TALE family protein