PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019199325.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | GATA | ||||||||
Protein Properties | Length: 304aa MW: 33801.4 Da PI: 9.2626 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 57.6 | 1.7e-18 | 220 | 253 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 C +C +tkTp+WR+gp g+ktLCnaCG++yr+ + XP_019199325.1 220 CLHCEVTKTPQWREGPMGPKTLCNACGVRYRSGR 253 99*****************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 304 aa Download sequence |
MMSMVEPGHW DGIATGANGG YDNFHDLLSI LDFPMESLEG DGFNDDWDAN LQCLGPIPSD 60 ALMGLQPVPQ LYTGNGSLGV TIKSEASVDN ISRQNQLLNY GEKASGAALL CPDKYSDHKS 120 GMFQTQTPTR ISENRALYLG KMIEAIKSNF IVPVGTRSKR MRCSKFKPWH FISASTKKKR 180 ERKLSQRSIA AKDIRNPQAN QAASDPCEQK GRQSFPVKKC LHCEVTKTPQ WREGPMGPKT 240 LCNACGVRYR SGRLFPEYRP AASPTFVPSL HSSSHKEVTE MRRKAGEEGV THGECQPWLR 300 THTK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08010.2 | 1e-44 | GATA family protein |