PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019199324.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family GATA
Protein Properties Length: 305aa    MW: 33929.6 Da    PI: 9.4143
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019199324.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA57.61.7e-18221254134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C +C +tkTp+WR+gp g+ktLCnaCG++yr+ +
  XP_019199324.1 221 CLHCEVTKTPQWREGPMGPKTLCNACGVRYRSGR 254
                     99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MKMSMVEPGH WDGIATGANG GYDNFHDLLS ILDFPMESLE GDGFNDDWDA NLQCLGPIPS  60
DALMGLQPVP QLYTGNGSLG VTIKSEASVD NISRQNQLLN YGEKASGAAL LCPDKYSDHK  120
SGMFQTQTPT RISENRALYL GKMIEAIKSN FIVPVGTRSK RMRCSKFKPW HFISASTKKK  180
RERKLSQRSI AAKDIRNPQA NQAASDPCEQ KGRQSFPVKK CLHCEVTKTP QWREGPMGPK  240
TLCNACGVRY RSGRLFPEYR PAASPTFVPS LHSSSHKEVT EMRRKAGEEG VTHGECQPWL  300
RTHTK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08010.22e-44GATA family protein