PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019199158.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 270aa    MW: 30397.7 Da    PI: 8.3787
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019199158.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM141.93.7e-4461362128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                      pGfrF Pt+eelv++yL+ k+eg++ ++++vi+ ++iy++ePw+Lp+     ++++ ++w+fF++r++++a+g r+ r+t++gyWkatg+   v
  XP_019199158.1   6 SPGFRFYPTEEELVSFYLHTKLEGNRRDIDRVIPALNIYDLEPWHLPRlsgeLCAGDMEQWFFFVPRQEREARGGRPCRTTATGYWKATGSPSYV 100
                     69***************************99****************546653344677************************************ PP

             NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +s++++++g+kk++vfy+g+ap g+kt+W m+eyr+
  XP_019199158.1 101 YSSGNKVIGVKKSMVFYNGKAPCGRKTKWKMNEYRA 136
                     **********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MGAEISPGFR FYPTEEELVS FYLHTKLEGN RRDIDRVIPA LNIYDLEPWH LPRLSGELCA  60
GDMEQWFFFV PRQEREARGG RPCRTTATGY WKATGSPSYV YSSGNKVIGV KKSMVFYNGK  120
APCGRKTKWK MNEYRAIEEV VMPTSTVPKL RHEMSLCRIY VISGSFRAFD RRPIGAPQSS  180
LQRRESGEGG GGSGCSNINI NIINDDDKTK TLMELETSKK SSSPPPPLSA SLMDEQCDDG  240
RMKMESTTNL NLCSMVKNVE PICHDWMGKA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.11e-86NAC family protein