PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019199064.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Protein Properties

Length: 319aa MW: 35044.9 Da PI: 6.2958

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019199064.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	40.2	6.1e-13	60	136	2	84
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 +k l++s++++ +l lpk+f+++h + ++ ++l de+gr+ e k+ ++k++ l++GW++F +++L gD+v + + XP_019199064.1 60 VKFLLHSHTTSGFWLGLPKDFCTSHLPN--HDTAIILVDENGRETESKYLIEKHG----LSGGWRGFSLQHNLVPGDVVYIVR 136 588999*****************533..5568***********777777....*****************98764 PP

Sequence ? help Back to Top
Protein Sequence Length: 319 aa Download sequence
MNPLAANKKV IKRRSPTPKK VQAKGEGSRR EYGCVDENSI AMRRGRELQA NLSPQFPSVV 60 KFLLHSHTTS GFWLGLPKDF CTSHLPNHDT AIILVDENGR ETESKYLIEK HGLSGGWRGF 120 SLQHNLVPGD VVYIVRANDS ANIAGAISLL DLSHYAQPIA TEGLLLEGDD IEENVLRIED 180 AADQLTRIQH EKPGLNYTLI AGAITETVKI ADGIKAATLA TGRDVLEVWD RTLIGVGHFG 240 MEVGFLRGRI SELIRLCEAA EIVSGKEKEK AIAEAEMKDL LHKVSKVSGV IKNLEEEIQA 300 HSGGERVEEV FKNVASADW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	7e-34	B3 family protein