PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019198774.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 400aa MW: 44593.1 Da PI: 5.2535

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019198774.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.6	4.3e-52	28	155	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l+pGfrFhPtdeelv +yL++k+ gk++++ ++++e+d+yk+ePw+L + ++k+++ ewyfFs+ d+ky +g+r nrat +gyWkatgkd++v XP_019198774.1 28 LAPGFRFHPTDEELVRYYLRRKACGKPFRF-QAVSEIDVYKSEPWELAEysSLKNRDLEWYFFSPVDRKYGNGSRLNRATGKGYWKATGKDRSVR 121 579***********************99.88**********84336667777*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + k++++g+kktLvf++grap+g++t+Wvmheyrl XP_019198774.1 122 H-KTQTIGMKKTLVFHSGRAPDGKRTNWVMHEYRL 155 .999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
MELQPPQDGA GVVAPAIPKR AVAPPTSLAP GFRFHPTDEE LVRYYLRRKA CGKPFRFQAV 60 SEIDVYKSEP WELAEYSSLK NRDLEWYFFS PVDRKYGNGS RLNRATGKGY WKATGKDRSV 120 RHKTQTIGMK KTLVFHSGRA PDGKRTNWVM HEYRLADEEL VKAGVIQDAF VLCRIFQKSG 180 LGPPNGDRYA PFIEEEWDDD TALVIPGGEA EDDAANGDDA HVEGNELDQA AALCKAPQSP 240 VEPQGLPFVC KRERSEDPEP LSLAQAKRSK HDDPSSSNAN GSEDSTTIQE PPTAMMTTTT 300 TTTNYSPALL EFPLLGSIEP KESHPTNVPT FDSSTLEKSV PPGYLKFISN LENEILNVSM 360 ERETLKIEVM RAQAMINILQ SRIDLLNKEN EDLRRVVRGG

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

MELQPPQDGA GVVAPAIPKR AVAPPTSLAP GFRFHPTDEE LVRYYLRRKA CGKPFRFQAV  60
SEIDVYKSEP WELAEYSSLK NRDLEWYFFS PVDRKYGNGS RLNRATGKGY WKATGKDRSV  120
RHKTQTIGMK KTLVFHSGRA PDGKRTNWVM HEYRLADEEL VKAGVIQDAF VLCRIFQKSG  180
LGPPNGDRYA PFIEEEWDDD TALVIPGGEA EDDAANGDDA HVEGNELDQA AALCKAPQSP  240
VEPQGLPFVC KRERSEDPEP LSLAQAKRSK HDDPSSSNAN GSEDSTTIQE PPTAMMTTTT  300
TTTNYSPALL EFPLLGSIEP KESHPTNVPT FDSSTLEKSV PPGYLKFISN LENEILNVSM  360
ERETLKIEVM RAQAMINILQ SRIDLLNKEN EDLRRVVRGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10480.2	5e-96	NAC family protein