PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019198128.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family HD-ZIP
Protein Properties Length: 328aa    MW: 37096.3 Da    PI: 4.916
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019198128.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox61.41.3e-1987140356
                     --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     k++++t +q++ Le+ Fe ++++  e++ +LAk+lgL+ rq+ +WFqNrRa++k
  XP_019198128.1  87 KKRRLTGDQVQFLEKSFEVENKLEPERKVQLAKELGLQPRQIAIWFQNRRARWK 140
                     56689************************************************9 PP
2HD-ZIP_I/II128.82.2e-4186176191
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                     ekkrrl+ +qv++LE+sFe e+kLeperKv+la+eLglqprq+a+WFqnrRAR+k kqlEkdy+ Lk++yd lk++ ++L ke+++L++e+
  XP_019198128.1  86 EKKRRLTGDQVQFLEKSFEVENKLEPERKVQLAKELGLQPRQIAIWFQNRRARWKGKQLEKDYDGLKARYDDLKAKYDSLLKEKDSLKAEV 176
                     69**************************************************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MEAGRGLFYG AGAGAGDSSF NTLFLQNQRL PFQSSKEPLL TPGFSPSFHG SSSMVSFCDG  60
KGGFFRKYDQ DENECENSDE YFLQPEKKRR LTGDQVQFLE KSFEVENKLE PERKVQLAKE  120
LGLQPRQIAI WFQNRRARWK GKQLEKDYDG LKARYDDLKA KYDSLLKEKD SLKAEVLRVT  180
DKLVVKGKEK ETLKFRDDIQ HPLEALSKDH MADSVAASSP ALPVKLEGTS PSKSDVLDSD  240
SPRYTDGVHS SFPDIGGDSS YVFEPERSDS DLSQDEDDRF SKNFMAASES LSVFPKVRED  300
HYPIAIPPTN SSLYGFPVED QTFGFWPY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1135143RRARWKGKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.13e-48HD-ZIP family protein