PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019197590.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 340aa MW: 37363.2 Da PI: 8.7708

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019197590.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	178	2.6e-55	10	137	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL +k+++ +++ ++i +vd++k+ePwdLp k+k +ekewyfFs rd+ky+tg r+nrat++gyWk+tgkdke++++ XP_019197590.1 10 LPPGFRFHPTDEELITFYLVNKISDAGFTA-RAIGDVDLNKCEPWDLPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNS 103 79***********************999.89***********99999************************************98 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++elvg+kktLvfy+grap+gekt+Wvmheyr+ XP_019197590.1 104 sTSELVGMKKTLVFYRGRAPRGEKTNWVMHEYRI 137 78889*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 340 aa Download sequence
MEGELKEESL PPGFRFHPTD EELITFYLVN KISDAGFTAR AIGDVDLNKC EPWDLPGKAK 60 MGEKEWYFFS LRDRKYPTGV RTNRATNTGY WKTTGKDKEI FNSSTSELVG MKKTLVFYRG 120 RAPRGEKTNW VMHEYRIHSK SSYRTNKQDE WVVCRVFQKS AGAKKYPSNH SRAVNPYTLE 180 IGPSMMSSQM IPPDHGFHFA MGPPPGRNAA AAAYITPAEM QEFNRVFRGA GGGATSAAIN 240 FPIHQPHQMN YPMGPTGAGG TGCFTISGLN LNLGGGSGGG SASSQAVLRP MPPPPTAMTQ 300 PDVLITSEAA GYVAADMGNP ANRYMGMDQC ADLDNYWPTY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24430.2	1e-107	NAC family protein