PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019197211.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | GATA | ||||||||
Protein Properties | Length: 142aa MW: 15624.4 Da PI: 9.0491 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 57.1 | 2.5e-18 | 62 | 94 | 1 | 33 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkk 33 Cs+C +t+Tp+WR+gp g+ tLCnaCG++yr XP_019197211.1 62 CSHCEATETPQWRKGPMGPNTLCNACGVRYRTG 94 ******************************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 142 aa Download sequence |
MSNLYFDFIV PIRKRTKRVR SASNPWIRRN GAPSSSTASA SSEKTPCGRQ QTSDGSKEFR 60 ECSHCEATET PQWRKGPMGP NTLCNACGVR YRTGQLFPEY RPANSPTFVP TLHSNSHRKG 120 VEEAAAMVEE DSVKSAAAAD AE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54810.2 | 4e-33 | GATA family protein |