PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019197060.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | ERF | ||||||||
Protein Properties | Length: 221aa MW: 24006.7 Da PI: 4.585 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.3 | 7.7e-18 | 50 | 100 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr + +g+Wv+eIr+p++ + r++lg+f +e+Aa+a++ a+++++g XP_019197060.1 50 PVYRGVRMRN-WGKWVSEIREPRK---KSRIWLGTFSNPEMAARAHDVAALSIKG 100 68*****998.**********843...6***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence |
MSSDPPDCSS SSEVACESTR AVLDSGSAEK EEPKKMTMKR SRDNSCSKHP VYRGVRMRNW 60 GKWVSEIREP RKKSRIWLGT FSNPEMAARA HDVAALSIKG NSAVLNFPDL AAALPRPASL 120 TPRDIQVAAA KAAAMEKFDP VSSPSPSPSS SCSSEIDPAT SEELSEIVEL PRLGTSFDSP 180 EVGSEFVYVD SVDGWLYPPP WLGSGADDDD SSSFESLLWN Y |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11590.1 | 1e-64 | ERF family protein |