PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019197057.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family GATA
Protein Properties Length: 369aa    MW: 40205.6 Da    PI: 7.0145
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019197057.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.11.1e-17262296135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C +C t kTp+WR gp g+ktLCnaCG++y++ +l
  XP_019197057.1 262 CLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRL 296
                     99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    
METPDFFQPP THYTTQFTPD KRHPSATADS KNNNNAADHF VVDDLLDFPN DDTMLAVVSD  60
ADAAALAADS SSATACNSSP FSAATQFAPA IACRNHLTDA PFSGEFFVPY EDVAELEWLS  120
NFVEESFSSE DLQKLQLISG MKAGNEDESS QSQSQSQTHH FQPEPNPATT FRPEMAAAVP  180
AKARSKRSRA AAPCNWTSRL LVSLSPSVDN VTTTTTTPAI SSSSESDLTT SSSGKKTAAP  240
KKKDAAAAAA AAAGSNGEGR KCLHCATDKT PQWRTGPMGP KTLCNACGVR YKSGRLVPEY  300
RPASSPTFVL TKHSNSHRKV LEIRRQKELV RAQQHHHQFL HQKMMFDVSN GDDYLIHHQH  360
IGPHFRHLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.15e-73GATA family protein