PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019196379.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 322aa    MW: 36965.2 Da    PI: 7.0286
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019196379.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM162.61.4e-50271592128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 
                      pGfrFhPtdeelv +yL++kve+++l++ e ik++diyk++PwdLpk+ + +++ewyfF+kr +ky+++ r+nr+t sg+Wkatg d++++s+ 
  XP_019196379.1  27 LPGFRFHPTDEELVGFYLRRKVEKRELSM-ELIKQIDIYKYDPWDLPKSSNVGDTEWYFFCKRGRKYRNSIRPNRVTGSGFWKATGIDRPIYSSa 120
                     69***************************.89***************988899****************************************98 PP

             NAM  96 ......kgelvglkktLvfykgrapkgektdWvmheyrl 128
                           +++ +glkk+Lv+y+g+a kg+ktdW+mhe+rl
  XP_019196379.1 121 paagenHRHCIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 159
                     8887666666***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MADAENQSSS VITKQDEEED DDVPVILPGF RFHPTDEELV GFYLRRKVEK RELSMELIKQ  60
IDIYKYDPWD LPKSSNVGDT EWYFFCKRGR KYRNSIRPNR VTGSGFWKAT GIDRPIYSSA  120
PAAGENHRHC IGLKKSLVYY RGSAGKGTKT DWMMHEFRLP ADHDKSTKHI ADIQSIAQEA  180
EVWTLCRILK RSVSHKREWK EVSAKRSNHY ANVNSTTYNN IESCCDDQKN NYIISFNAPL  240
MVNNHTIATN NNNNNNNGCH QLLTAQLNHV VSQPNQFISY STNANAYSSP VVAAPDIDEL  300
LKHEDWDEIT HFSFFTAPYP GH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.16e-88NAC family protein