PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019196378.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 323aa    MW: 37067.2 Da    PI: 6.7486
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019196378.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM161.62.9e-50271602128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                      pGfrFhPtdeelv +yL++kve+++l++ e ik++diyk++PwdLp ++ + +++ewyfF+kr +ky+++ r+nr+t sg+Wkatg d++++s+
  XP_019196378.1  27 LPGFRFHPTDEELVGFYLRRKVEKRELSM-ELIKQIDIYKYDPWDLPtESSNVGDTEWYFFCKRGRKYRNSIRPNRVTGSGFWKATGIDRPIYSS 120
                     69***************************.89***************666777999**************************************9 PP

             NAM  96 .......kgelvglkktLvfykgrapkgektdWvmheyrl 128
                            +++ +glkk+Lv+y+g+a kg+ktdW+mhe+rl
  XP_019196378.1 121 apaagenHRHCIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 160
                     88887666666***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MADAENQSSS VITKQDEEED DDVPVILPGF RFHPTDEELV GFYLRRKVEK RELSMELIKQ  60
IDIYKYDPWD LPTESSNVGD TEWYFFCKRG RKYRNSIRPN RVTGSGFWKA TGIDRPIYSS  120
APAAGENHRH CIGLKKSLVY YRGSAGKGTK TDWMMHEFRL PADHDKSTKH IADIQSIAQE  180
AEVWTLCRIL KRSVSHKREW KEVSAKRSNH YANVNSTTYN NIESCCDDQK NNYIISFNAP  240
LMVNNHTIAT NNNNNNNNGC HQLLTAQLNH VVSQPNQFIS YSTNANAYSS PVVAAPDIDE  300
LLKHEDWDEI THFSFFTAPY PGH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.14e-86NAC family protein