PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019196368.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NAC
Protein Properties Length: 348aa    MW: 38458.6 Da    PI: 4.6908
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019196368.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM95.48.6e-3088352128
             NAM  52 kaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +++e ew+fF++++kky++g++ nrat++g+Wkatg+d++v + ++e vg+kktLv+++grap g++tdWvmheyrl
  XP_019196368.1   8 NSREVEWHFFTRTEKKYTNGNKINRATDKGFWKATGRDRAVRH-NSEIVGMKKTLVYHEGRAPAGRRTDWVMHEYRL 83 
                     45667**************************************.999****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    
MAGFCAVNSR EVEWHFFTRT EKKYTNGNKI NRATDKGFWK ATGRDRAVRH NSEIVGMKKT  60
LVYHEGRAPA GRRTDWVMHE YRLTTEELGR AALQQKDAYF LCKIYLKSRG AAFNGEDWEN  120
DAVDSLVPFE DAAAYAEDEE DSELNLTNVF NFQGGASSSQ AVQLPEKPQG FRSLLRIRER  180
EEDDDDYDED EAVYLDKGKK PKLMMLDLFP GVKGGSDSSS SATISDPQPT KKVAAAGAAA  240
ETEFSSGLLN FSLAAIQPNK VQENHGSSAF NSSSLEDSLP PGYLKFITEL EEERDTLKHA  300
LMNSEATVSC LQADNDRLAE EISRLRSLLP GGQGLAAACN IQSDISSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.11e-42NAC family protein