PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019196366.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 380aa MW: 42575.6 Da PI: 4.6213

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019196366.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	48.1	3.7e-15	23	68	2	48
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp 48 + GfrFhPtd+elv ++L++kv + ++++ e i+evdiy++ePw+L+ XP_019196366.1 23 AHGFRFHPTDQELVLYFLRRKVFQMPFRF-EPITEVDIYSFEPWKLH 68 68***********************99.89***********96 PP
2	NAM	61.5	2.7e-19	70	117	80	128
NAM 80 sgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +g+Wkatg+d++v + ++e vg+kktLv+++grap g++tdW+mheyrl XP_019196366.1 70 KGFWKATGRDRAVRH-NSEIVGMKKTLVYHEGRAPAGRRTDWLMHEYRL 117 8************.999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MAAAEQQHEE ALAMVMPPKP RLAHGFRFHP TDQELVLYFL RRKVFQMPFR FEPITEVDIY 60 SFEPWKLHDK GFWKATGRDR AVRHNSEIVG MKKTLVYHEG RAPAGRRTDW LMHEYRLTTE 120 ELAKAALQQK DAYFLCKIYL KSRGAAFMGE DWENDAVDSL VPFEDAAAYA EDEEDSELNL 180 TNVFNFQGGV SSSQAVQLPE KPQGFRSLLR IREREEDDDD YEDEDEAVYL DKGKKPKLMM 240 LDLFPGIKGG SDSSSSATIS DPQPTKKAAA AAVTEFSSGL LNFSLAAIQP NKVQENHGSS 300 AFNSSSLEDS LPPGYLKFIS ELEEERDTLK HALMNSEATF SCLQADNDKL AEEISRLRSL 360 LPGGQGLGAA CDIESDQSAS

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MAAAEQQHEE ALAMVMPPKP RLAHGFRFHP TDQELVLYFL RRKVFQMPFR FEPITEVDIY  60
SFEPWKLHDK GFWKATGRDR AVRHNSEIVG MKKTLVYHEG RAPAGRRTDW LMHEYRLTTE  120
ELAKAALQQK DAYFLCKIYL KSRGAAFMGE DWENDAVDSL VPFEDAAAYA EDEEDSELNL  180
TNVFNFQGGV SSSQAVQLPE KPQGFRSLLR IREREEDDDD YEDEDEAVYL DKGKKPKLMM  240
LDLFPGIKGG SDSSSSATIS DPQPTKKAAA AAVTEFSSGL LNFSLAAIQP NKVQENHGSS  300
AFNSSSLEDS LPPGYLKFIS ELEEERDTLK HALMNSEATF SCLQADNDKL AEEISRLRSL  360
LPGGQGLGAA CDIESDQSAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	3e-47	NAC family protein