PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019194783.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 595aa MW: 67131.2 Da PI: 4.9442

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019194783.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	163.8	6.5e-51	13	140	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeel+ ++Lk+++ ++++ + +vi e+d+yk++P dLp +k+k+++++w+fFs+ d+ky++g+r+nratk+gyWk+tgkd++++ XP_019194783.1 13 LPPGFRFHPTDEELLLYFLKRRICRRQILT-DVIGETDVYKWDPDDLPelSKLKTGDRQWFFFSPMDRKYPNGRRTNRATKHGYWKTTGKDRTIT 106 79***********************988.99**********95449999************************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++++vg+kktLvfykgrap+ge+tdWvmhey+l XP_019194783.1 107 C-NSRDVGVKKTLVFYKGRAPTGERTDWVMHEYTL 140 .999***************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 595 aa Download sequence
MVMAKEGFPD QRLPPGFRFH PTDEELLLYF LKRRICRRQI LTDVIGETDV YKWDPDDLPE 60 LSKLKTGDRQ WFFFSPMDRK YPNGRRTNRA TKHGYWKTTG KDRTITCNSR DVGVKKTLVF 120 YKGRAPTGER TDWVMHEYTL GEMELSRCQS AQDYYALYKV FKKSGPGPKN GEQYGAPFNE 180 EDWADDECFG TNLPVEQEKS RKNVNDVGLI NDPKPNDVLP DLPPLIDGLE EFLKYIADEP 240 SLTELVPVDN SYVDKLVGNE DTANALLDHS AGETYLPVQT ATLFSLPPLH NEQANFDPIH 300 SWTLQPQLHE ATEVTSAPVV EEDFLEGFLE MNDLDGSELS VNYNLDKPVE NYGSQQVVDF 360 DGLNEFELYQ DAAMFLHDMG AIGVGQGAGQ ATNHVANSII NPSEVSQMIN QQSYLNEGNE 420 FNHQLWSHDL RWCSTVNLTE ASQSANLPLT SGMVYGNHFE DHPVGANLNQ NNIQDDATNS 480 SFSSALWVFI ESIPATPASA AESALVNKAF ERMSSFIRRI RLNARNVKVA SGNTSATSRR 540 SGKSKNGLFC FSLIGVLCAI LWMFVHRSLI VVGRKSCHYF GIFMKSRESN IVYYK

Sequence ? help Back to Top

Protein Sequence Length: 595 aa Download sequence

MVMAKEGFPD QRLPPGFRFH PTDEELLLYF LKRRICRRQI LTDVIGETDV YKWDPDDLPE  60
LSKLKTGDRQ WFFFSPMDRK YPNGRRTNRA TKHGYWKTTG KDRTITCNSR DVGVKKTLVF  120
YKGRAPTGER TDWVMHEYTL GEMELSRCQS AQDYYALYKV FKKSGPGPKN GEQYGAPFNE  180
EDWADDECFG TNLPVEQEKS RKNVNDVGLI NDPKPNDVLP DLPPLIDGLE EFLKYIADEP  240
SLTELVPVDN SYVDKLVGNE DTANALLDHS AGETYLPVQT ATLFSLPPLH NEQANFDPIH  300
SWTLQPQLHE ATEVTSAPVV EEDFLEGFLE MNDLDGSELS VNYNLDKPVE NYGSQQVVDF  360
DGLNEFELYQ DAAMFLHDMG AIGVGQGAGQ ATNHVANSII NPSEVSQMIN QQSYLNEGNE  420
FNHQLWSHDL RWCSTVNLTE ASQSANLPLT SGMVYGNHFE DHPVGANLNQ NNIQDDATNS  480
SFSSALWVFI ESIPATPASA AESALVNKAF ERMSSFIRRI RLNARNVKVA SGNTSATSRR  540
SGKSKNGLFC FSLIGVLCAI LWMFVHRSLI VVGRKSCHYF GIFMKSRESN IVYYK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34190.1	1e-118	NAC family protein