PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019194465.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 354aa MW: 39069 Da PI: 8.109

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019194465.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	181.4	2.2e-56	20	147	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL kkv ++++++ ++i+evd++k+ePw+Lp+k++ +ekewyfFs rd+ky+tg r+nrat++gyWkatgkd+e++s+ XP_019194465.1 20 LPPGFRFHPTDEELITYYLLKKVVDSTFSA-RAIAEVDLNKCEPWELPEKARMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSS 113 79************************99.89***********99999************************************97 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 + +lvg+kktLvfy+grapkgekt+Wvmheyrl XP_019194465.1 114 kTCALVGMKKTLVFYRGRAPKGEKTNWVMHEYRL 147 45567*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MEAFLSYQQR LDCGGGDANL PPGFRFHPTD EELITYYLLK KVVDSTFSAR AIAEVDLNKC 60 EPWELPEKAR MGEKEWYFFS LRDRKYPTGL RTNRATEAGY WKATGKDREI YSSKTCALVG 120 MKKTLVFYRG RAPKGEKTNW VMHEYRLDGK FAYHYFSRAS KDEWVISRVF QKSGAAAAAG 180 VGKRKMSSIN LYPEVSSPSS VSLPPLVESS SYNNTATSAL AIDNESCSFD GGHAATKEHV 240 PCFSTAAPQT FNSNASLFDL PPPPLAAANF SPLIDPSSTR FARNNNVGVP AFPSLRSLQE 300 NLHLPFFFPS ATPPPLHGGL GDQMGGYGSS IPSWPAATES QKVGSSELDC MWSY

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MEAFLSYQQR LDCGGGDANL PPGFRFHPTD EELITYYLLK KVVDSTFSAR AIAEVDLNKC  60
EPWELPEKAR MGEKEWYFFS LRDRKYPTGL RTNRATEAGY WKATGKDREI YSSKTCALVG  120
MKKTLVFYRG RAPKGEKTNW VMHEYRLDGK FAYHYFSRAS KDEWVISRVF QKSGAAAAAG  180
VGKRKMSSIN LYPEVSSPSS VSLPPLVESS SYNNTATSAL AIDNESCSFD GGHAATKEHV  240
PCFSTAAPQT FNSNASLFDL PPPPLAAANF SPLIDPSSTR FARNNNVGVP AFPSLRSLQE  300
NLHLPFFFPS ATPPPLHGGL GDQMGGYGSS IPSWPAATES QKVGSSELDC MWSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53950.1	1e-106	NAC family protein